Evidence map›Paper›PMID 32629119›Full record

ArticleCellular and molecular gastroenterology and hepatology2020

Proline-Rich Acidic Protein 1 (PRAP1) Protects the Gastrointestinal Epithelium From Irradiation-Induced Apoptosis.

Alexandra A Wolfarth, Xu Liu, Trevor M Darby, Darra J Boyer, Jocelyn B Spizman, Joshua A Owens, Bindu Chandrasekharan, Crystal R Naudin, Krisztina Z Hanley, Brian S Robinson and 3 more

Open access · goldAbstract read
In one paragraph

Article in Cellular and molecular gastroenterology and hepatology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
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  11. Article
  12. Article
  13. Intestinal Infection ofFrontiers in microbiology · 2021
    Review
  14. A Little Disorder Can Be Healthy: PRAP1 as a Protective Factor in the Intestine.Cellular and molecular gastroenterology and hepatology · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Alexandra A WolfarthDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Xu LiuDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
Trevor M DarbyDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia.
Darra J BoyerDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Jocelyn B SpizmanDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Joshua A OwensDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia.
Bindu ChandrasekharanDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Crystal R NaudinDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia.
Krisztina Z HanleyDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Brian S RobinsonDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia.
Eric A OrtlundDepartment of Biochemistry, Emory University School of Medicine, Atlanta, Georgia.
Rheinallt M JonesDivision of Gastroenterology, Hepatology and Nutrition, Department of Pediatrics, Emory University School of Medicine, Atlanta, Georgia; Emory Microbiome Research Center, Emory University School of Medicine, Atlanta, Georgia.
Andrew S NeishDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, Georgia; Emory Microbiome Research Center, Emory University School of Medicine, Atlanta, Georgia. Electronic address: aneish@emory.edu.
Emory University · US

Funding

Microbial Influence on Mucosal HomeostasisR01AI064462 · NIAID · EMORY UNIVERSITY · PI NEISH, ANDREW S · 2006 to 2022
$5.5M
Targeting LRH-1 - Phospholipid Signaling in Metabolic PathwaysR01DK095750 · NIDDK · EMORY UNIVERSITY · PI ORTLUND, ERIC A · 2012 to 2016
$1.7M
Intestinal cell response to bacterial apoptotic signalsR01DK071604 · NIDDK · EMORY UNIVERSITY · PI NEISH, ANDREW S · 2007 to 2011
$1.5M
The molecular mechanisms of intestinal homeostasis.R01DK098391 · NIDDK · EMORY UNIVERSITY · PI JONES, RHEINALLT MELFYN · 2014 to 2017
$1.4M
Control of Epithelial Proliferation by the MicrobiotaR01CA179424 · NCI · EMORY UNIVERSITY · PI JONES, RHEINALLT MELFYN, NEISH, ANDREW S · 2014 to 2017
$1.3M
NCI NIH HHS R01 CA179424NIAID NIH HHS R01 AI064462NIDDK NIH HHS R01 DK071604NIDDK NIH HHS R01 DK095750NIDDK NIH HHS R01 DK098391
6 · The paper itself

Abstract

BACKGROUND &

aimsThe intestinal epithelium must be resilient to physiochemical stress to uphold the physiological barrier separating the systemic compartment from the microbial and antigenic components of the gut lumen. Identifying proteins that mediate protection and enhancing their expression is therefore a clear approach to promote intestinal health. We previously reported that oral ingestion of the probiotic Lactobacillus rhamnosus GG not only induced the expression of several recognized cytoprotective factors in the murine colon, but also many genes with no previously described function, including the gene encoding proline-rich acidic protein 1 (PRAP1). PRAP1 is a highly expressed protein in the epithelium of the gastrointestinal tract and we sought to define its function in this tissue.

methodsPurified preparations of recombinant PRAP1 were analyzed biochemically and PRAP1 antisera were used to visualize localization in tissues. Prap1

resultsPRAP1 is a 17-kilodalton intrinsically disordered protein with no recognizable sequence homology. PRAP1 expression levels were high in the epithelia of the small intestine. Although Prap1

conclusionsPRAP1 is an intrinsically disordered protein highly expressed by the gastrointestinal epithelium and functions at exposed surfaces to protect the barrier from oxidative insult.

Indexed as

AnimalsApoptosisCell LineCells, CulturedGastrointestinal MicrobiomeGene DeletionHumansIntestinal MucosaMiceMice, Inbred C57BLPregnancy ProteinsPregnancy Proteinspregnant specific uterus protein, PSUPproline-rich acidic protein 1, humanIntrinsically Disordered ProteinsOxidative Stressp21Small Intestine

Identifiers

PMID32629119
PMCPMC7498829
OpenAlexW3039004374

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.