Evidence map›Paper›PMID 32628659›Full record

ArticlePLoS computational biology2020

Trade-off between local transmission and long-range dispersal drives infectious disease outbreak size in spatially structured populations.

Elisa Benincà, Thomas Hagenaars, Gert Jan Boender, Jan van de Kassteele, Michiel van Boven

Abstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Elisa BenincàCentre for Infectious Disease Control, National Institute for Public Health and the Environment, The Netherlands.ORCID 0000-0002-9261-9315
Thomas HagenaarsDepartment of Bacteriology and Epidemiology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.ORCID 0000-0003-2209-125X
Gert Jan BoenderDepartment of Bacteriology and Epidemiology, Wageningen Bioveterinary Research, Lelystad, The Netherlands.ORCID 0000-0002-8780-2481
Jan van de KassteeleCentre for Infectious Disease Control, National Institute for Public Health and the Environment, The Netherlands.ORCID 0000-0001-5926-6709
Michiel van BovenCentre for Infectious Disease Control, National Institute for Public Health and the Environment, The Netherlands.ORCID 0000-0002-0841-2400

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transmission of infectious diseases between immobile hosts (e.g., plants, farms) is strongly dependent on the spatial distribution of hosts and the distance-dependent probability of transmission. As the interplay between these factors is poorly understood, we use spatial process and transmission modelling to investigate how epidemic size is shaped by host clustering and spatial range of transmission. We find that for a given degree of clustering and individual-level infectivity, the probability that an epidemic occurs after an introduction is generally higher if transmission is predominantly local. However, local transmission also impedes transfer of the infection to new clusters. A consequence is that the total number of infections is maximal if the range of transmission is intermediate. In highly clustered populations, the infection dynamics is strongly determined by the probability of transmission between clusters of hosts, whereby local clusters act as multiplier of infection. We show that in such populations, a metapopulation model sometimes provides a good approximation of the total epidemic size, using probabilities of local extinction, the final size of infections in local clusters, and probabilities of cluster-to-cluster transmission. As a real-world example we analyse the case of avian influenza transmission between poultry farms in the Netherlands.

Indexed as

Disease OutbreaksDisease Transmission, InfectiousAlgorithmsAnimal HusbandryAnimalsCluster AnalysisFarmsInfectious Disease MedicineInfluenza in BirdsModels, BiologicalNetherlandsNormal DistributionPopulation DynamicsPoultryProbabilityProportional Hazards Models

Identifiers

PMID32628659
PMCPMC7365471

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.