Evidence map›Paper›PMID 32628469›Full record

ArticleBiochemistry2020

Structure and Role of BCOR PUFD in Noncanonical PRC1 Assembly and Disease.

Sarah J Wong, Olga Senkovich, Jason A Artigas, Micah D Gearhart, Udayar Ilangovan, David W Graham, Kelsey N Abel, Tianrong Yu, Andrew P Hinck, Vivian J Bardwell and 1 more

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Clinicopathological and genomic characterization of BCORL1-driven high-grade endometrial stromal sarcomas.Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc · 2021
    Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Sarah J WongDepartment of Biochemistry, University of Texas Health Science Center at San Antonio, MSC 7760, 7703 Floyd Curl Drive, San Antonio, Texas 78229-3990, United States.
Olga SenkovichDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.
Jason A ArtigasDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.
Micah D GearhartDepartment of Genetics, Cell Biology and Development, Masonic Cancer Center and Developmental Biology Center, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Udayar IlangovanDepartment of Biochemistry, University of Texas Health Science Center at San Antonio, MSC 7760, 7703 Floyd Curl Drive, San Antonio, Texas 78229-3990, United States.
David W GrahamDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.
Kelsey N AbelDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.
Tianrong YuDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.
Andrew P HinckDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania 15260, United States.
Vivian J BardwellDepartment of Genetics, Cell Biology and Development, Masonic Cancer Center and Developmental Biology Center, University of Minnesota, Minneapolis, Minnesota 55455, United States.
Chongwoo A KimDepartment of Biochemistry and Molecular Genetics, Midwestern University, 19555 North 59th Avenue, Glendale, Arizona 85308, United States.ORCID 0000-0002-9309-0863
Midwestern University · USThe University of Texas Health Science Center at San Antonio · USUniversity of Minnesota · USUniversity of Pittsburgh · US

Funding

TISSUE CULTURE---COREP30CA054174 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Lei Zheng · 1991 to 2026
$59.1M
LIGAND/RECEPTOR INTERACTIONS IN THE TGF BETA SUPERFAMILYR01GM058670 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HINCK, ANDREW P · 1999 to 2017
$3.6M
Molecular Basis of Action of the Putative Oncogene BCL6R01CA071540 · NCI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI BARDWELL, VIVIAN J · 2002 to 2012
$3.0M
Control of Trophoblast Differentiation in Placental DevelopmentR01HD084459 · NICHD · UNIVERSITY OF MINNESOTA · PI BARDWELL, VIVIAN J · 2016 to 2020
$1.7M
The role of SAM polymerization in Polycomb-dependent chromatin structuresR01GM114338 · NIGMS · MIDWESTERN UNIVERSITY · PI FRANCIS, NICOLE JANE, KIM, CHONGWOO A · 2016 to 2019
$1.0M
A Novel Domain That Recruits the Polycomb GroupF31GM099418 · NIGMS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI WONG, SARAH JUNCO · 2013 to 2014
$54k
NCI NIH HHS P30 CA054174NCI NIH HHS R01 CA071540NICHD NIH HHS R01 HD084459NIGMS NIH HHS F31 GM099418NIGMS NIH HHS R01 GM058670NIGMS NIH HHS R01 GM114338
6 · The paper itself

Abstract

Polycomb repression complex 1 (PRC1) is a multiprotein assembly that regulates transcription. The Polycomb group ring finger 1 protein (PCGF1) is central in the assembly of the noncanonical PRC1 variant called PRC1.1 through its direct interaction with BCOR (BCL-6-interacting corepressor) or its paralog, BCOR-like 1 (BCORL1). Previous structural studies revealed that the C-terminal PUFD domain of BCORL1 is necessary and sufficient to heterodimerize with the RAWUL domain of PCGF1 and, together, form a new protein-protein binding interface that associates with the histone demethylase KDM2B. Here, we show that the PUFD of BCOR and BCORL1 differ in their abilities to assemble with KDM2B. Unlike BCORL1, the PUFD of BCOR alone does not stably assemble with KDM2B. Rather, additional residues N-terminal to the BCOR PUFD are necessary for stable association. Nuclear magnetic resonance (NMR) structure determination and

Indexed as

F-Box ProteinsHumansJumonji Domain-Containing Histone DemethylasesModels, MolecularPolycomb Repressive Complex 1Protein BindingProtein DomainsProtein Interaction MapsProtein MultimerizationProto-Oncogene ProteinsRepressor ProteinsBCORL1 protein, humanBCOR protein, humanF-Box ProteinsJumonji Domain-Containing Histone DemethylasesKDM2A protein, humanPCGF1 protein, humanPolycomb Repressive Complex 1Proto-Oncogene ProteinsRepressor Proteins

Identifiers

PMID32628469
PMCPMC8544800
OpenAlexW3039077291

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.