Evidence map›Paper›PMID 32627049›Full record

ArticleAbdominal radiology (New York)2020

Importance of phase enhancement for machine learning classification of solid renal masses using texture analysis features at multi-phasic CT.

Nicola Schieda, Kathleen Nguyen, Rebecca E Thornhill, Matthew D F McInnes, Mark Wu, Nick James

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Article in Abdominal radiology (New York), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Nicola SchiedaDepartment of Medical Imaging, The Ottawa Hospital, 1053 Carling Avenue, Room C159, Ottawa, ON, K1Y 4E9, Canada. nschieda@toh.ca.ORCID http://orcid.org/0000-0002-2653-4786
Kathleen NguyenDepartment of Medical Imaging, The Ottawa Hospital, 1053 Carling Avenue, Room C159, Ottawa, ON, K1Y 4E9, Canada.
Rebecca E ThornhillDepartment of Medical Imaging, The Ottawa Hospital, 1053 Carling Avenue, Room C159, Ottawa, ON, K1Y 4E9, Canada.
Matthew D F McInnesDepartment of Medical Imaging, The Ottawa Hospital, 1053 Carling Avenue, Room C159, Ottawa, ON, K1Y 4E9, Canada.
Mark WuDepartment of Medical Imaging, The Ottawa Hospital, 1053 Carling Avenue, Room C159, Ottawa, ON, K1Y 4E9, Canada.
Nick JamesSoftware Solutions, The Ottawa Hospital, Ottawa, Canada.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo compare machine learning (ML) of texture analysis (TA) features for classification of solid renal masses on non-contrast-enhanced CT (NCCT), corticomedullary (CM) and nephrographic (NG) phase contrast-enhanced (CE) CT. MATERIALS AND

methodsWith IRB approval, we retrospectively identified 177 consecutive solid renal masses (116 renal cell carcinoma [RCC]; 51 clear cell [cc], 40 papillary, 25 chromophobe and 61 benign tumors; 49 oncocytomas and 12 fat-poor angiomyolipomas) with renal protocol CT between 2012 and 2017. Tumors were independently segmented by two blinded radiologists. Twenty-five 2-dimensional TA features were extracted from each phase. Diagnostic accuracy for 1) RCC versus benign tumor and 2) cc-RCC versus other tumor was assessed using XGBoost.

resultsML of texture analysis features on different phases achieved mean area under the ROC curve (AUC [SD]), sensitivity/specificity for 1) RCC vs benign = 0.70(0.19), 96%/32% on CM-CECT and 0.71(0.14), 83%/58% on NG-CECT and; 2) cc-RCC vs other = 0.77(0.12), 49%/90% on CM-CECT and 0.71(0.16), 22%/94% on NG-CECT. There was no difference in AUC comparing CECT to NCCT (p = 0.058-0.54) and no improvement when combining data across all three phases compared single-phase assessment (p = 0.39-0.68) for either outcome. AUCs decreased when ML models were trained with one phase and tested on a different phase for both outcomes (RCC;p = 0.045-0.106, cc-RCC; < 0.001).

conclusionAccuracy of machine learning classification of renal masses using texture analysis features did not depend on phase; however, models trained using one phase performed worse when tested on another phase particularly when associating NCCT and CECT. These findings have implications for large registries which use varying CT protocols to study renal masses.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsContrast MediaDiagnosis, DifferentialHumansMachine LearningRetrospective StudiesTomography, X-Ray ComputedContrast MediaComputed tomographyMachine learningRenal cell carcinomaTexture analysis

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.