Evidence map›Paper›PMID 32621916›Full record

ArticleJournal of neuroscience methods2020

Filtered correlation and allowed frequency spectra in dynamic functional connectivity.

Victor M Vergara, Vince D Calhoun

Abstract read
In one paragraph

Article in Journal of neuroscience methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

2 authors.

Victor M VergaraTri-Institutional Center for Translational Research in Neuroimaging and Data Science, (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA. Electronic address: vvergara@gsu.edu.
Vince D CalhounTri-Institutional Center for Translational Research in Neuroimaging and Data Science, (TReNDS), Georgia State University, Georgia Institute of Technology, and Emory University, Atlanta, GA, USA. Electronic address: vcalhoun@gsu.edu.

Funding

Transcranial Direct Current Stimulation for Treatment of Auditory Verbal HalluciP20GM103472 · NIGMS · THE MIND RESEARCH NETWORK · PI ABBOTT, CHRISTOPHER C · 2012 to 2017
$14.3M
Multivariate methods for identifying multitask/multimodal brain imaging biomarkersR01EB006841 · NIBIB · THE MIND RESEARCH NETWORK · PI VINCE D CALHOUN, Sergey Plis · 2007 to 2026
$9.8M
Male/Female differences in psychosis and mood disorders:Dynamic imaging-genomic models for characterizing and predicting psychosis and mood dR01MH118695 · NIMH · GEORGIA STATE UNIVERSITY · PI ADALI, TULAY, CALHOUN, VINCE D · 2019 to 2023
$3.8M
Flexible multivariate models for linking multi-scale connectome and genome data in Alzheimer's disease and related disordersRF1AG063153 · NIA · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D, LIU, JINGYU · 2019 to 2020
$3.5M
Data-driven solutions for temporal, spatial, and spatiotemporal dynamic functional connectivityR01MH123610 · NIMH · GEORGIA STATE UNIVERSITY · PI ADALI, TULAY, CALHOUN, VINCE D · 2021 to 2025
$3.1M
Unified multivariate data-driven solutions for static and dynamic brain connectivityR01EB020407 · NIBIB · THE MIND RESEARCH NETWORK · PI ADALI, TULAY, CALHOUN, VINCE D · 2015 to 2018
$2.7M
NIA NIH HHS RF1 AG063153NIBIB NIH HHS R01 EB006841NIBIB NIH HHS R01 EB020407NIGMS NIH HHS P20 GM103472NIMH NIH HHS R01 MH118695NIMH NIH HHS R01 MH123610
6 · The paper itself

Abstract

backgroundDynamic functional connectivity enables us to study brain connectivity occurring at different frequencies. Techniques like sliding window correlation allow for the estimation of time varying connectivity and its frequency spectrum content. Since correlation is equal to the cosine of the phase (cos θ) between activation amplitudes of two brain regions, we assume that phase is the relevant functional connectivity feature and leave out any contamination from activation amplitudes. NEW

methodFirst, this work studies the conditions by which time varying correlation can be separated from nuisance activation amplitudes that are not phase related. Second, we propose the filtered sliding window correlation to perform time varying estimation of cosine-phase (cos θ (t)) and nuisance filtering in one single step.

resultsMathematical models predict the correlation frequencies that should be filtered out to avoid overlap with the activation amplitude spectra. Filtered sliding window correlation excluded nuisance frequencies with an accurate estimation of time varying correlation. Real data outcomes empirically suggest that fMRI frequencies of interest extend up to 0.05 Hz. COMPARISON WITH EXISTING

methodsCompared with sliding window methods, the filtered sliding window correlation achieves better estimation for frequencies of interest.

conclusionsThe filtered sliding window correlation approach allows controlling for nuisance frequencies unrelated to time varying phase estimation.

Indexed as

Brain MappingMagnetic Resonance ImagingBrainModels, TheoreticalDynamic functional connectivityFilteringSliding window correlation

Identifiers

PMID32621916
PMCPMC7430194

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.