Evidence map›Paper›PMID 32621915›Full record

ArticleJournal of neuroscience methods2020

Long-term labeling of microelectrode tracks with fluorescent latex microspheres.

Joshua B Simmons, Robert S Turner, Jonathan C Horton

Open access · greenAbstract read
In one paragraph

Article in Journal of neuroscience methods, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.1field-weighted citation impact, top 60% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Neural Correlates of Perceptual Plasticity in the Auditory Midbrain and Thalamus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2025
    Article
  2. Article
  3. Interocular Suppression in Primary Visual Cortex in Strabismus.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Joshua B SimmonsDepartment of Ophthalmology, Program in Neuroscience, University of California, San Francisco, CA, 94143, USA.
Robert S TurnerDepartment of Neurobiology, Center for the Neural Basis of Cognition, University of Pittsburgh, Pittsburgh, PA 15261, USA.
Jonathan C HortonDepartment of Ophthalmology, Program in Neuroscience, University of California, San Francisco, CA, 94143, USA. Electronic address: hortonj@vision.ucsf.edu.
University of California, San Francisco · USUniversity of Pittsburgh · US

Funding

Rapid-Prototyping and Design CoreP30EY002162 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LAMBA, DEEPAK ASHOK · 1985 to 2024
$16.8M
STRUCTURAL BASIS OF AMBLYOPIA AND STRABISMUSR01EY010217 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HORTON, JONATHAN C · 1993 to 2018
$8.5M
Horton_Admin_Supplement_EY029703R01EY029703 · NEI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HORTON, JONATHAN C · 2019 to 2024
$3.4M
NEI NIH HHS P30 EY002162NEI NIH HHS R01 EY010217NEI NIH HHS R01 EY029703
6 · The paper itself

Abstract

backgroundAfter physiological recordings are performed in behaving animals, it is valuable to identify microelectrode tracks in histological sections so that neuronal responses can be correlated with brain anatomy. However, no good method currently exists for long-term labeling, so that microelectrode tracks can be recovered months or even years after recording sessions. NEW

methodPenetrations were made into the brains of mice with microelectrodes coated with fluorescent dyes packaged into 0.2 μm polystyrene microspheres, followed by survival periods of 3 days, 2, 4, or 6 months. Sections were examined by fluorescence microscopy before and after cytochrome oxidase histochemistry to identify microelectrode tracks.

resultsAfter all 4 survival periods, 0.2 μm fluorescent microspheres clearly marked the tracks of microelectrode penetrations. COMPARISON WITH EXISTING

methodsFluorescent microspheres label microelectrode penetrations for longer than do fluorescent lipophilic dyes, such as FM 1-43FX. The label appears punctate, and resistant to degradation, because it is protected by the barrier of the polystyrene micro-container.

conclusionsCoating of microelectrodes with fluorescent microspheres allows one to identify the penetration track in histological sections half a year later. This technique may be useful when electrophysiological recording sessions are being carried out in behaving animals, with plans to identify electrode tracks in histological sections many months later.

Indexed as

LatexNeuronsAnimalsFluorescent DyesMiceMicroelectrodesMicrospheresFluorescent DyesLatexCytochrome oxidaseDiIFM 1-43FXLatex beadMicroelectrodeNeural recording

Identifiers

PMID32621915
PMCPMC7442242
OpenAlexW3039426297

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.