Evidence map›Paper›PMID 32621866›Full record

ArticleBiophysical journal2020

The C-Terminus and Third Cytoplasmic Loop Cooperatively Activate Mouse Melanopsin Phototransduction.

Juan C Valdez-Lopez, Stephen T Petr, Matthew P Donohue, Robin J Bailey, Meheret Gebreeziabher, Evan G Cameron, Julia B Wolf, Veronika A Szalai, Phyllis R Robinson

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Melanopsin phototransduction: beyond canonical cascades.The Journal of experimental biology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Juan C Valdez-LopezDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Stephen T PetrDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Matthew P DonohueCenter for Nanoscale and Technology, National Institutes of Standards and Technology, Gaithersburg, Maryland; Maryland NanoCenter, University of Maryland College Park, College Park, Maryland.
Robin J BaileyDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Meheret GebreeziabherDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Evan G CameronDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Julia B WolfDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland.
Veronika A SzalaiCenter for Nanoscale and Technology, National Institutes of Standards and Technology, Gaithersburg, Maryland.
Phyllis R RobinsonDepartment of Biological Sciences, University of Maryland Baltimore County, Baltimore, Maryland. Electronic address: probinso@umbc.edu.
University of Maryland, Baltimore County · USCenter for Nanoscale Science and Technology · US

Funding

The MARC U*STAR Program at UMBCT34GM008663 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI ROBINSON, PHYLLIS R · 1997 to 2019
$21.9M
EXPAND PARTICIPATION BY MINORITIES IN BIOMEDICAL SCIENCER25GM055036 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SUMMERS, MICHAEL FINLEY · 1996 to 2021
$16.9M
Regulation of the intrinsic melanopsin-based light response in ipRGCsR01EY027202 · NEI · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI RONALD Lane BROWN, Joseph Leffler · 2017 to 2026
$5.3M
Graduate Training at The Chemistry Biology InterfaceT32GM066706 · NIGMS · UNIVERSITY OF MARYLAND BALTIMORE COUNTY · PI SELEY-RADTKE, KATHERINE L, SMITH, AARON T · 2004 to 2023
$3.3M
NEI NIH HHS R01 EY027202NIGMS NIH HHS R25 GM055036NIGMS NIH HHS T32 GM066706NIGMS NIH HHS T34 GM008663
6 · The paper itself

Abstract

Melanopsin, an atypical vertebrate visual pigment, mediates non-image-forming light responses including circadian photoentrainment and pupillary light reflexes and contrast detection for image formation. Melanopsin-expressing intrinsically photosensitive retinal ganglion cells are characterized by sluggish activation and deactivation of their light responses. The molecular determinants of mouse melanopsin's deactivation have been characterized (i.e., C-terminal phosphorylation and β-arrestin binding), but a detailed analysis of melanopsin's activation is lacking. We propose that an extended third cytoplasmic loop is adjacent to the proximal C-terminal region of mouse melanopsin in the inactive conformation, which is stabilized by the ionic interaction of these two regions. This model is supported by site-directed spin labeling and electron paramagnetic resonance spectroscopy of melanopsin, the results of which suggests a high degree of steric freedom at the third cytoplasmic loop, which is increased upon C-terminus truncation, supporting the idea that these two regions are close in three-dimensional space in wild-type melanopsin. To test for a functionally critical C-terminal conformation, calcium imaging of melanopsin mutants including a proximal C-terminus truncation (at residue 365) and proline mutation of this proximal region (H377P, L380P, Y382P) delayed melanopsin's activation rate. Mutation of all potential phosphorylation sites, including a highly conserved tyrosine residue (Y382), into alanines also delayed the activation rate. A comparison of mouse melanopsin with armadillo melanopsin-which has substitutions of various potential phosphorylation sites and a substitution of the conserved tyrosine-indicates that substitution of these potential phosphorylation sites and the tyrosine residue result in dramatically slower activation kinetics, a finding that also supports the role of phosphorylation in signaling activation. We therefore propose that melanopsin's C-terminus is proximal to intracellular loop 3, and C-terminal phosphorylation permits the ionic interaction between these two regions, thus forming a stable structural conformation that is critical for initiating G-protein signaling.

Indexed as

Light Signal TransductionRod OpsinsAnimalsLightMelanopsinMicePhosphorylationRetinal Ganglion CellsMelanopsinRod Opsins

Identifiers

PMID32621866
PMCPMC7376183
OpenAlexW3036638219

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.