ArticlePlant molecular biology2020
Genome-wide identification of WD40 genes reveals a functional diversification of COP1-like genes in Rosaceae.
Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed, 32 citations in OpenAlex.
- Loss of DET1 in High Pigment 2 Tomato Prevents High Temperature Repression of Anthocyanin Biosynthesis in Fruit Through HY5 Stabilization.Plant, cell & environment · 2026Article
- Dynamic transcriptomic features accompanying the onset of first flowering in roses.BMC plant biology · 2025Article
- Two WD40 proteins, AhWD40-170 and AhWD40-171, referred to regulation of anthocyanin accumulation in peanut (Arachis hypogaea L.).BMC plant biology · 2025Article
- Genome-Wide Identification of theInternational journal of molecular sciences · 2025Article
- Genome-Wide Identification of the Lectin Receptor-like Kinase Gene Family inInternational journal of molecular sciences · 2024Article
- Article
- Review
- Genome-Wide Identification of WD40 Proteins inGenes · 2023Article
- Genome-wide analysis of WD40 protein family and functional characterization ofFrontiers in plant science · 2023Article
- Genome-Wide Identification and Salt Stress Response Analysis of the bZIP Transcription Factor Family in Sugar Beet.International journal of molecular sciences · 2022Article
- Genome-Wide Analysis of Anthocyanin Biosynthesis Regulatory WD40 GeneFrontiers in plant science · 2022Article
- Expansion and expression diversity ofPlant diversity · 2021Article
- AnDHN, a Dehydrin Protein FromFrontiers in plant science · 2021Article
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Authors and funding
10 authors at 2 institutions in 1 country.
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Abstract
key messageGenome-wide identification of WD40-like genes reveals a duplication of COP1-like genes, one of the key players involved in regulation of flowering time and photomorphogenesis, with strong functional diversification in Rosaceae. WD40 proteins play crucial roles in a broad spectrum of developmental and physiological processes. Here, we conducted a systematic characterization of this family of genes in Rosa chinensis 'Old Blush' (OB), a founder genotype for modern rose domestication. We identified 187 rose WD40 genes and classified them into 5 clusters and 15 subfamilies with 11 of RcWD40s presumably generated via tandem duplication. We found RcWD40 genes were expressed differentially following stages of vegetative and reproductive development. We detected a duplication of CONSTITUTIVE PHOTOMORPHOGENIC1-like genes in rose (RcCOP1 and RcCOP1L) and other Rosaceae plants. Featuring a distinct expression pattern and a different profile of cis-regulatory-elements in the transcriptional regulatory regions, RcCOP1 seemed being evolutionarily conserved while RcCOP1L did not dimerize with RcHY5 and RcSPA4. Our data thus reveals a functional diversification of COP1-like genes in Rosacaeae plants, and provides a valuable resource to explore the potential function and evolution of WD40-like genes in Rosaceae plants.
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