Evidence map›Paper›PMID 32620538›Full record

ReviewDNA repair2020

Twenty years of t-loops: A case study for the importance of collaboration in molecular biology.

Ľubomír Tomáška, Anthony J Cesare, Taghreed M AlTurki, Jack D Griffith

Open access · hybridAbstract readHistorical ArticleReview
In one paragraph

Review in DNA repair, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Article
  3. Telomere Crisis Shapes Cancer Evolution.Cold Spring Harbor perspectives in biology · 2026
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Mammalian telomeric RNA (TERRA) can be translated to produce valine-arginine and glycine-leucine dipeptide repeat proteins.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Telomere Targeting Approaches in Cancer: Beyond Length Maintenance.International journal of molecular sciences · 2022
    Review
  17. Review
  18. Article
  19. Article
  20. Sequence, Chromatin and Evolution of Satellite DNA.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Ľubomír TomáškaDepartment of Genetics, Comenius University in Bratislava, Faculty of Natural Sciences, Ilkovicova 6, 84215, Bratislava, Slovakia.
Anthony J CesareGenome Integrity Unit, Children's Medical Research Institute, University of Sydney, Westmead, NSW, 2145, Australia.
Taghreed M AlTurkiLineberger Comprehensive Cancer Center and Departments of Microbiology and Immunology, and Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA.
Jack D GriffithLineberger Comprehensive Cancer Center and Departments of Microbiology and Immunology, and Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, NC, 27599, USA. Electronic address: jdg@med.unc.edu.
University of North Carolina at Chapel Hill · USComenius University Bratislava · SKUniversity of Sydney · AU

Funding

Nucleoprotein structures formed at sites of DNA damageR01ES013773 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRIFFITH, JACK D · 2005 to 2015
$3.2M
R-loops at the telomere as a toxic source of genomic instabilityR01ES031635 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GRIFFITH, JACK D · 2020 to 2024
$1.7M
Epidemiology of Indoor Air Pollution and Human HealthF30ES013373 · NIEHS · PURDUE UNIVERSITY WEST LAFAYETTE · PI RINNE, SEPPO T · 2004 to 2006
$127k
NIEHS NIH HHS F30 ES013373NIEHS NIH HHS R01 ES013773NIEHS NIH HHS R01 ES031635
6 · The paper itself

Abstract

Collaborative studies open doors to breakthroughs otherwise unattainable by any one laboratory alone. Here we describe the initial collaboration between the Griffith and de Lange laboratories that led to thinking about the telomere as a DNA template for homologous recombination, the proposal of telomere looping, and the first electron micrographs of t-loops. This was followed by collaborations that revealed t-loops across eukaryotic phyla. The Griffith and Tomáška/Nosek collaboration revealed circular telomeric DNA (t-circles) derived from the linear mitochondrial chromosomes of nonconventional yeast, which spurred discovery of t-circles in ALT-positive human cells. Collaborative work between the Griffith and McEachern labs demonstrated t-loops and t-circles in a series of yeast species. The de Lange and Zhuang laboratories then applied super-resolution light microscopy to demonstrate a genetic role for TRF2 in loop formation. Recent work from the Griffith laboratory linked telomere transcription with t-loop formation, providing a new model of the t-loop junction. A recent collaboration between the Cesare and Gaus laboratories utilized super-resolution light microscopy to provide details about t-loops as protective elements, followed by the Boulton and Cesare laboratories showing how cell cycle regulation of TRF2 and RTEL enables t-loop opening and reformation to promote telomere replication. Twenty years after the discovery of t-loops, we reflect on the collective history of their research as a case study in collaborative molecular biology.

Indexed as

DNA RepairDNA ReplicationHomologous RecombinationAnimalsDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA, CircularEukaryotaHistory, 21st CenturyHumansMicroscopyMolecular BiologyMuscle ProteinsSingle Molecule ImagingTEA Domain Transcription FactorsTelomereDNA-Binding ProteinsDNA, CircularMuscle ProteinsTEAD4 protein, humanTEA Domain Transcription FactorsTelomeric Repeat Binding Protein 2Transcription FactorsDNA repairDouble strand breaksR-loopSuper resolution microscopyT-circleTelomeresT-loop

Identifiers

PMID32620538
PMCPMC8679138
OpenAlexW3037135160

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.