Evidence map›Paper›PMID 32619338›Full record

ArticleFEBS open bio2020

Cracking of jujube fruits is associated with differential expression of metabolic genes.

Yaling Liu, Pengfei Zhang, Yaping Geng, Xiaodong Xie, Pengfei Wen

Abstract read
In one paragraph

Article in FEBS open bio, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Overexpression ofInternational journal of molecular sciences · 2024
    Article
  3. Article
  4. Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yaling LiuCollege of Life Science, Shanxi Agricultural University, Taigu, China.
Pengfei ZhangCollege of Horticulture, Shanxi Agricultural University, Taigu, China.
Yaping GengCollege of Life Science, Shanxi Agricultural University, Taigu, China.
Xiaodong XieCollege of Life Science, Shanxi Agricultural University, Taigu, China.
Pengfei WenCollege of Horticulture, Shanxi Agricultural University, Taigu, China.ORCID 0000-0001-7955-1283

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cracks in the skin of jujube fruit reduce freshness and quality; thus, greater understanding of the molecular mechanism that underlies cracking is required to improve fruit production. In this study, we profiled genes that are differentially expressed between cracked and normal jujube fruits through RNA sequencing (RNA-seq). We selectively confirmed differentially expressed genes (DEGs) using quantitative RT-PCR. Among 1036 DEGs, 785 genes were up-regulated and 251 genes were down-regulated in cracked jujube fruits. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis indicated that some of these DEGs encode proteins involved in metabolic processes (including growth hormone and surface wax production) in cracked jujube fruits. In summary, we have identified differentially expressed metabolic genes between cracked and normal jujube fruits, which may serve as the basis for further studies of fruit quality control.

Indexed as

FruitGene Expression Regulation, PlantRNA-SeqZiziphusdifferentially expressed metabolic genefruit crackingjujubemetabolic pathwaytranscriptome

Identifiers

PMID32619338
PMCPMC7459416

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.