Evidence map›Paper›PMID 32618013›Full record

ArticleJournal of periodontal research2020

Detection of association between periodontitis and polymorphisms of IL-1β + 3954 and TNF-α -863 in the Korean population after controlling for confounding risk factors.

Hyun-Joo Kim, Eun-Hye Kim, Ae Kyung Park, Yerang Shin, Jihoon Kang, Jaesung Lim, Jong Bhak, Ju-Youn Lee, Byung Chul Kim, Ji-Young Joo

Open access · hybridAbstract read
In one paragraph

Article in Journal of periodontal research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Hyun-Joo KimDental Research Institute, Pusan National University Dental Hospital, Yangsan, Republic of Korea.ORCID https://orcid.org/0000-0001-7553-6289
Eun-Hye KimHelixco Inc., Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0002-9225-5865
Ae Kyung ParkCollege of Pharmacy and Research Institute of Life and Pharmaceutical Sciences, Sunchon National University, Suncheon, Republic of Korea.ORCID https://orcid.org/0000-0001-6636-3515
Yerang ShinHelixco Inc., Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0002-2302-430X
Jihoon KangHelixco Inc., Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0003-2624-0443
Jaesung LimHelixco Inc., Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0003-0080-9398
Jong BhakKorean Genomics Industrialization and Commercialization Center, Ulsan National Institute of Science and Technology, Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0002-4228-1299
Ju-Youn LeeDental Research Institute, Pusan National University Dental Hospital, Yangsan, Republic of Korea.ORCID https://orcid.org/0000-0002-0772-033X
Byung Chul KimClinomics Inc, Ulsan, Republic of Korea.ORCID https://orcid.org/0000-0002-4891-9679
Ji-Young JooDental Research Institute, Pusan National University Dental Hospital, Yangsan, Republic of Korea.ORCID https://orcid.org/0000-0002-4050-5797
Helixmith (South Korea) · KRPusan National University Dental Hospital · KRPreClinOmics (United States) · USSunchon National University · KR

Funding

National Research Foundation of Korea (NRF) 2015R1A4A1041219National Research Foundation of Korea (NRF) 2018R1A5A2023879Small and Medium Business Administration (SMBA, South Korea) C0445482
6 · The paper itself

Abstract

BACKGROUND AND

objectiveInterleukin (IL)-1 and tumor necrosis factor (TNF)-α are inflammatory cytokines that play an important role in periodontitis, and their genetic variations have been suggested to be associated with increased risk of periodontitis. Focusing on three single nucleotide polymorphisms (SNPs) of IL-1α + 4845, IL-1β + 3954, and TNF-α -863, we aimed to investigate the relationship between periodontitis risk and the polymorphisms of IL-1 α/β and TNF-α in Koreans. MATERIAL AND

methodsMouthwash samples from 548 subjects (135 controls without periodontitis, 387 generalized chronic periodontitis patients, and 26 generalized aggressive periodontitis patients) were collected for isolation of genomic DNA. Genotyping of selected SNPs was performed using real-time PCR. Univariable associations between the polymorphisms and periodontitis were assessed by chi-squared test or Fisher's exact test. To evaluate the association after controlling for confounding effects of various risk factors, we stratified the subjects according to the presence or absence of self-reported diseases and employed multiple logistic regression model to adjust for age, smoking status, and oral hygiene indices and behaviors.

resultsSignificant association of IL-1β + 3954 and TNF-α -863 polymorphisms with periodontitis was observed after adjusting for the confounding risk factors, but not in univariable association analysis. The significant association between genotype CT of IL-1β + 3954 and increased risk of advanced periodontitis was consistently detected regardless of the status of self-reported diseases. In the polymorphism of TNF-α -863, the genotype with minor allele (CA + AA) was significantly associated with periodontitis susceptibility, which was observed only in the subjects with self-reported diseases.

conclusionThe results suggest that genetic variations of IL-1β + 3954 and TNF-α -863 are associated with increased risk of periodontitis in Koreans. In addition, our findings underscore the importance of controlling for confounding risk factors to detect significant association between genetic factors and risk of periodontitis. A further well-designed large-scale study is needed to warrant our results.

Indexed as

Interleukin-1betaPeriodontitisPolymorphism, Single NucleotideTumor Necrosis Factor-alphaCase-Control StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansMaleRepublic of KoreaRisk FactorsInterleukin-1betaTumor Necrosis Factor-alphainterleukin-1periodontitissingle nucleotide polymorphismtumor necrosis factor-α

Identifiers

PMID32618013
PMCPMC7689763
OpenAlexW3038840660

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.