Evidence map›Paper›PMID 32616836›Full record

ArticleScientific reports2020

Genome-wide mapping and allelic fingerprinting provide insights into the genetics of resistance to wheat stripe rust in India, Kenya and Mexico.

Philomin Juliana, Ravi Prakash Singh, Julio Huerta-Espino, Sridhar Bhavani, Mandeep S Randhawa, Uttam Kumar, Arun Kumar Joshi, Pradeep Kumar Bhati, Hector Eduardo Villasenor Mir, Chandra Nath Mishra and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Article
  3. Mapping QTLs for adult-plant resistance to yellow rust in a hard winter wheat population Heyne × Lakin.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  4. Article
  5. Genome-wide association mapping for the identification of stripe rust resistance loci in US hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Philomin JulianaInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico. p.juliana@cgiar.org.
Ravi Prakash SinghInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Julio Huerta-EspinoCampo Experimental Valle de Mexico, Instituto Nacional de Investigaciones Forestales, Agricolas Y Pecuarias (INIFAP), Chapingo, Mexico.
Sridhar BhavaniInternational Maize and Wheat Improvement Center (CIMMYT), Texcoco, Mexico.
Mandeep S RandhawaInternational Maize and Wheat Improvement Center (CIMMYT), Nairobi, Kenya.
Uttam KumarCIMMYT, NASC Complex, New Delhi, India.
Arun Kumar JoshiCIMMYT, NASC Complex, New Delhi, India.
Pradeep Kumar BhatiCIMMYT, NASC Complex, New Delhi, India.
Hector Eduardo Villasenor MirCampo Experimental Valle de Mexico, Instituto Nacional de Investigaciones Forestales, Agricolas Y Pecuarias (INIFAP), Chapingo, Mexico.
Chandra Nath MishraICAR-IIWBR, Agrasain Marg, Karnal, India.
Gyanendra Pratap SinghICAR-IIWBR, Agrasain Marg, Karnal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stripe or yellow rust (YR) caused by Puccinia striiformis Westend. f. sp. tritici Erikss. is a persistent biotic-stress threatening global wheat production. To broaden our understanding of the shared genetic basis of YR resistance across multi-site and multi-year evaluations, we performed a large genome-wide association study using 43,706 YR observations on 23,346 wheat lines from the International Maize and Wheat Improvement Center evaluated between 2013 and 2019 at sites in India, Kenya and Mexico, against predominant races prevalent in the countries. We identified 114 repeatable markers tagging 20 quantitative trait loci (QTL) associated with YR on ten chromosomes including 1D, 2A, 2B, 2D, 3A, 4A, 4D, 5A, 5B and 6B, among which four QTL, QYr.cim-2DL.2, QYr.cim-2AS.1, QYr.cim-2BS.2 and QYr.cim-2BS.3 were significant in more than ten datasets. Furthermore, we report YR-associated allelic fingerprints for the largest panel of wheat breeding lines (52,067 lines) till date, creating substantial opportunities for YR favorable allele enrichment using molecular markers. Overall, the markers and fingerprints reported in this study provide excellent insights into the genetic architecture of YR resistance in different geographical regions, time-periods and wheat germplasm and are a huge resource to the global wheat breeding community for accelerating YR resistance breeding efforts.

Indexed as

Genome, PlantPucciniaAllelesChromosomes, PlantDisease ResistanceGenetic MarkersGenome-Wide Association StudyKenyaLinkage DisequilibriumMexicoPlant BreedingPlant DiseasesPrincipal Component AnalysisQuantitative Trait LociSeedlingsTriticumGenetic Markers

Identifiers

PMID32616836
PMCPMC7331708

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.