Evidence map›Paper›PMID 32615988›Full record

ArticleBMC infectious diseases2020

Epidemiology and genetic diversity of circulating dengue viruses in Medellin, Colombia: a fever surveillance study.

Jacqueline Kyungah Lim, Mabel Carabali, Erwin Camacho, Diana Carolina Velez, Andrea Trujillo, Jorge Egurrola, Kang-Sung Lee, Ivan Dario Velez, Jorge E Osorio

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

  1. Observational
  2. Article
  3. Article
  4. Effect of Socioeconomic Strata and Land Cover on Dengue Hotspots in Medellin, Colombia.The American journal of tropical medicine and hygiene · 2025
    Article
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  8. Characterization of Dengue Virus Serotype 2 Cosmopolitan Genotype Circulating in Colombia.The American journal of tropical medicine and hygiene · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Jacqueline Kyungah LimDengue Vaccine Initiative, International Vaccine Institute, SNU Research Park, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea. kalim@ivi.int.ORCID http://orcid.org/0000-0001-6744-7825
Mabel CarabaliDengue Vaccine Initiative, International Vaccine Institute, SNU Research Park, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.
Erwin CamachoInvestigaciones Biomedicas, Universidad de Sucre, Cra 28 # 5-267, Barrio Puerta Roja, Sincelejo, Sucre, Colombia.
Diana Carolina VelezPrograma de Estudio y Control de Enfermedades Tropicales (PECET), Universidad de Antioquia, calle 67 No. 53, 108, Medellín, Antioquia, Colombia.
Andrea TrujilloPrograma de Estudio y Control de Enfermedades Tropicales (PECET), Universidad de Antioquia, calle 67 No. 53, 108, Medellín, Antioquia, Colombia.
Jorge EgurrolaPrograma de Estudio y Control de Enfermedades Tropicales (PECET), Universidad de Antioquia, calle 67 No. 53, 108, Medellín, Antioquia, Colombia.
Kang-Sung LeeDengue Vaccine Initiative, International Vaccine Institute, SNU Research Park, 1 Gwanak-ro, Gwanak-gu, Seoul, 08826, Republic of Korea.
Ivan Dario VelezPrograma de Estudio y Control de Enfermedades Tropicales (PECET), Universidad de Antioquia, calle 67 No. 53, 108, Medellín, Antioquia, Colombia.
Jorge E OsorioDepartment of Pathobiological Sciences, University of Wisconsin, 500 Lincoln Dr, Madison, WI, 53706, USA.
Universidad de Antioquia · COInternational Vaccine Institute · KRUniversity of Sucre · COUniversity of Wisconsin–Madison · US

Funding

Bill and Melinda Gates Foundation OPP 1016669
6 · The paper itself

Abstract

backgroundDengue fever is a major public health problem in Colombia. A fever surveillance study was conducted for evaluation of the clinical, epidemiological, and molecular patterns of dengue, prior to Chikungunya and Zika epidemics.

methodsIn November 2011-February 2014, a passive facility-based surveillance was implemented in Santa Cruz Hospital, Medellin, and enrolled eligible febrile patients between 1 and 65 years-of-age. Acute and convalescent blood samples were collected 10-21 days apart and tested for dengue using IgM/IgG ELISA. RNA was extracted for serotyping using RT-PCR on acute samples and genotyping was performed by sequencing.

resultsAmong 537 febrile patients enrolled during the study period, 29% (n = 155) were identified to be dengue-positive. Only 7% of dengue cases were hospitalized, but dengue-positive patients were 2.6 times more likely to be hospitalized, compared to non-dengue cases, based on a logistic regression. From those tested with RT-PCR (n = 173), 17 were dengue-confirmed based on PCR and/or virus isolation showing mostly DENV-3 (n = 9) and DENV-4 (n = 7) with 1 DENV-1. Genotyping results showed that: DENV-1 isolate belongs to the genotype V or American/African genotype; DENV-3 isolates belong to genotype III; and DENV-4 isolates belong to the II genotype and specifically to the IIb sub-genotype or linage.

conclusionsOur surveillance documented considerable dengue burden in Santa Cruz comuna during non-epidemic years, and genetic diversity of circulating DENV isolates, captured prior to Chikungunya epidemic in 2014 and Zika epidemic in 2015. Our study findings underscore the need for continued surveillance and monitoring of dengue and other arboviruses and serve as epidemiological and molecular evidence base for future studies to assess changes in DENV transmission in Medellin, given emerging and re-emerging arboviral diseases in the region.

Indexed as

Genetic VariationAdolescentAdultAgedChildChild, PreschoolColombiaDengueDengue VirusEndemic DiseasesEnzyme-Linked Immunosorbent AssayFemaleFeverGenotypeHumansIncidenceColombiaDengueGenotypingSurveillance

Identifiers

PMID32615988
PMCPMC7331258
OpenAlexW3040256307

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.