Evidence map›Paper›PMID 32612181›Full record

ArticleScientific reports2020

miRNAs involved in transcriptome remodeling during pollen development and heat stress response in Solanum lycopersicum.

Mario Keller, Enrico Schleiff, Stefan Simm

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  9. Article
  10. Review
  11. miR160: An Indispensable Regulator in Plant.Frontiers in plant science · 2022
    Review
  12. Article
  13. Article
  14. Plants (Basel, Switzerland) · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Mario KellerDepartment of Biosciences, Molecular Cell Biology of Plants, Goethe University, 60438, Frankfurt am Main, Germany.
Enrico SchleiffDepartment of Biosciences, Molecular Cell Biology of Plants, Goethe University, 60438, Frankfurt am Main, Germany. schleiff@bio.uni-frankfurt.de.
Stefan SimmDepartment of Biosciences, Molecular Cell Biology of Plants, Goethe University, 60438, Frankfurt am Main, Germany.
Goethe University Frankfurt · DEFrankfurt Institute for Advanced Studies · DE

Funding

Marie Curie SPOT-ITN
6 · The paper itself

Abstract

Cellular transitions during development and stress response depend on coordinated transcriptomic and proteomic alterations. Pollen is particular because its development is a complex process that includes meiotic and mitotic divisions which causes a high heat sensitivity of these cells. Development and stress response are accompanied by a reprogramming of the transcriptome, e.g. by post-transcriptional regulation via miRNAs. We identified known and potentially novel miRNAs in the transcriptome of developing and heat-stressed pollen of Solanum lycopersicum (tomato). The prediction of target mRNAs yielded an equal number of predicted target-sites in CDS and 3'UTR regions of target mRNAs. The result enabled the postulation of a possible link between miRNAs and a fine-tuning of transcription factor abundance during pollen development. miRNAs seem to play a role in the pollen heat stress response as well. We identified several heat stress transcription factors and heat shock proteins as putative targets of miRNAs in response to heat stress, thereby placing these miRNAs as important elements of thermotolerance. Moreover, for members of the AP2, SBP and ARF family members we could predict a miRNA-mediated regulation during development via the miR172, mir156 and mir160-family strengthening the current concept of a cross-connection between development and stress response in plants.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantHeat-Shock ProteinsHeat-Shock ResponseMicroRNAsPollenSolanum lycopersicumThermotoleranceTranscriptomeHeat-Shock ProteinsMicroRNAs

Identifiers

PMID32612181
PMCPMC7329895
OpenAlexW3038804804

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.