ArticlePlants (Basel, Switzerland)2020
High-Throughput Sequencing Facilitates Discovery of New Plant Viruses in Poland.
Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.
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Who cites it
17 citing papers in PubMed, 41 citations in OpenAlex.
- Variability and population structure of watermelon mosaic virus in zucchini crops in Poland.The Journal of general virology · 2026Article
- Discovery of novel 'sugarcane totivirus 1' from Saccharum officinarum by high-throughput sequencing.Molecular biology reports · 2025Article
- High-Throughput Sequencing Detects a Viral Complex inAdvances in virology · 2025Article
- High-throughput virome profiling reveals complex viral diversity, co-infection patterns, and novel viruses inFrontiers in plant science · 2025Article
- The Oxford Nanopore MinION as a Versatile Technology for the Diagnosis and Characterization of Emerging Plant Viruses.Methods in molecular biology (Clifton, N.J.) · 2024Article
- Occurrence, distribution, and genetic diversity of faba bean viruses in China.Frontiers in microbiology · 2024Article
- Occurrence, Distribution, and Management of Aphid-Transmitted Viruses in Cucurbits in Spain.Pathogens (Basel, Switzerland) · 2023Review
- Review
- Genetic Differentiation and Migration Fluxes of Viruses from Melon Crops and Crop Edge Weeds.Journal of virology · 2022Article
- Article
- Complete Genome Sequence of Clover Yellow Mosaic Virus Isolated from White Clover in Japan.Microbiology resource announcements · 2022Article
- Article
- The Virome of 'Lamon Bean': Application of MinION Sequencing to Investigate the Virus Population Associated with Symptomatic Beans in the Lamon Area, Italy.Plants (Basel, Switzerland) · 2022Article
- Metagenomic Studies of Viruses in Weeds and Wild Plants: A Powerful Approach to Characterise Variable Virus Communities.Viruses · 2021Review
- Molecular Characterization of Potato Virus Y (PVY) Using High-Throughput Sequencing: Constraints on Full Genome Reconstructions Imposed by Mixed Infection Involving Recombinant PVY Strains.Plants (Basel, Switzerland) · 2021Article
- Assessment of the Current Status of Potyviruses in Watermelon and Pumpkin Crops in Spain: Epidemiological Impact of Cultivated Plants and Mixed Infections.Plants (Basel, Switzerland) · 2021Article
- Differential Synergistic Interactions Among Four Different Wheat-Infecting Viruses.Frontiers in microbiology · 2021Article
Corrections and comments
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Authors and funding
5 authors at 1 institution in 1 country.
Funding
Abstract
Viruses cause epidemics on all major crops of agronomic importance, and a timely and accurate identification is essential for control. High throughput sequencing (HTS) is a technology that allows the identification of all viruses without prior knowledge on the targeted pathogens. In this paper, we used HTS technique for the detection and identification of different viral species occurring in single and mixed infections in plants in Poland. We analysed various host plants representing different families. Within the 20 tested samples, we identified a total of 13 different virus species, including those whose presence has not been reported in Poland before: clover yellow mosaic virus (ClYMV) and melandrium yellow fleck virus (MYFV). Due to this new finding, the obtained sequences were compared with others retrieved from GenBank. In addition, cucurbit aphid-borne yellows virus (CABYV) was also detected, and due to the recent occurrence of this virus in Poland, a phylogenetic analysis of these new isolates was performed. The analysis revealed that CABYV population is highly diverse and the Polish isolates of CABYV belong to two different phylogenetic groups. Our results showed that HTS-based technology is a valuable diagnostic tool for the identification of different virus species originating from variable hosts, and can provide rapid information about the spectrum of plant viruses previously not detected in a region.
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