Evidence map›Paper›PMID 32609278›Full record

ArticleGenetics and molecular biology2020

Systems chemo-biology analysis of DNA damage response and cell cycle effects induced by coal exposure.

Jose F Torres-Ávila, Lyda Espitia-Pérez, Diego Bonatto, Fernanda Rabaioli da Silva, Iuri Marques de Oliveira, Luís F O Silva, Dione Silva Corrêa, Johnny Ferraz Dias, Juliana da Silva, João Antonio Pêgas Henriques

Open access · goldAbstract read
In one paragraph

Article in Genetics and molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Jose F Torres-ÁvilaUniversidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Departamento de Biofísica, Porto Alegre, RS, Brazil.ORCID http://orcid.org/0000-0002-3951-0214
Lyda Espitia-PérezUniversidad del Sinú, Grupo de Investigación Biomédica y Biología Molecular, Montería, Córdoba, Colombia.
Diego BonattoCentro de Biotecnologia da Universidade Federal do Rio Grande do Sul, Departamento de Biologia Molecular e Biotecnologia, Porto Alegre, RS, Brazil.
Fernanda Rabaioli da SilvaUniversidade La Salle, Canoas, RS, Brazil.
Iuri Marques de OliveiraUniversidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Departamento de Biofísica, Porto Alegre, RS, Brazil.
Luís F O SilvaUniversidad de la Costa, Civil and Environmental Department, Barranquilla, Colombia.
Dione Silva CorrêaUniversidade Luterana do Brasil, Programa de Pós-Graduação em Genética e Toxicologia Aplicada, Centro de Pesquisa de Produtos e Desenvolvimento, Canoas, RS, Brazil.
Johnny Ferraz DiasUniversidade Federal do Rio Grande do Sul, Instituto de Física, Laboratório de Implantação de Íons, Porto Alegre, RS, Brazil.
Juliana da SilvaUniversidade Luterana do Brasil, Laboratório de Toxicologia Genética, Canoas, RS, Brazil.
João Antonio Pêgas HenriquesUniversidade Federal do Rio Grande do Sul, Centro de Biotecnologia, Departamento de Biofísica, Porto Alegre, RS, Brazil.
Universidade Federal do Rio Grande do Sul · BRUniversidade La Salle · BRUniversidad del Sinú · COUniversidade Luterana do Brasil · BRUniversity of the Coast · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell cycle alterations are among the principle hallmarks of cancer. Consequently, the study of cell cycle regulators has emerged as an important topic in cancer research, particularly in relation to environmental exposure. Particulate matter and coal dust around coal mines have the potential to induce cell cycle alterations. Therefore, in the present study, we performed chemical analyses to identify the main compounds present in two mineral coal samples from Colombian mines and performed systems chemo-biology analysis to elucidate the interactions between these chemical compounds and proteins associated with the cell cycle. Our results highlight the role of oxidative stress generated by the exposure to the residues of coal extraction, such as major inorganic oxides (MIOs), inorganic elements (IEs) and polycyclic aromatic hydrocarbons (PAH) on DNA damage and alterations in the progression of the cell cycle (blockage and/or delay), as well as structural dysfunction in several proteins. In particular, IEs such as Cr, Ni, and S and PAHs such as benzo[a]pyrene may have influential roles in the regulation of the cell cycle through DNA damage and oxidative stress. In this process, cyclins, cyclin-dependent kinases, zinc finger proteins such as TP53, and protein kinases may play a central role.

Identifiers

PMID32609278
PMCPMC7315349
OpenAlexW3037448271

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.