Evidence map›Paper›PMID 32605600›Full record

ArticleBMC microbiology2020

Pseudoscorpion Wolbachia symbionts: diversity and evidence for a new supergroup S.

Emilie Lefoulon, Travis Clark, Fanni Borveto, Marco Perriat-Sanguinet, Catherine Moulia, Barton E Slatko, Laurent Gavotte

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
8.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 61 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Emilie LefoulonMolecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA.
Travis ClarkMolecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA.
Fanni BorvetoISEM, University of Montpellier, Montpellier, France.
Marco Perriat-SanguinetISEM, University of Montpellier, Montpellier, France.
Catherine MouliaISEM, University of Montpellier, Montpellier, France.
Barton E SlatkoMolecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA. slatko@neb.com.ORCID 0000-0002-5288-6398
Laurent GavotteISEM, University of Montpellier, Montpellier, France.
Université de Montpellier · FRNew England Biolabs (United States) · US

Funding

New England Biolabs -
6 · The paper itself

Abstract

backgroundWolbachia are the most widely spread endosymbiotic bacteria, present in a wide variety of insects and two families of nematodes. As of now, however, relatively little genomic data has been available. The Wolbachia symbiont can be parasitic, as described for many arthropod systems, an obligate mutualist, as in filarial nematodes or a combination of both in some organisms. They are currently classified into 16 monophyletic lineage groups ("supergroups"). Although the nature of these symbioses remains largely unknown, expanded Wolbachia genomic data will contribute to understanding their diverse symbiotic mechanisms and evolution.

resultsThis report focuses on Wolbachia infections in three pseudoscorpion species infected by two distinct groups of Wolbachia strains, based upon multi-locus phylogenies. Geogarypus minor harbours wGmin and Chthonius ischnocheles harbours wCisc, both closely related to supergroup H, while Atemnus politus harbours wApol, a member of a novel supergroup S along with Wolbachia from the pseudoscorpion Cordylochernes scorpioides (wCsco). Wolbachia supergroup S is most closely related to Wolbachia supergroups C and F. Using target enrichment by hybridization with Wolbachia-specific biotinylated probes to capture large fragments of Wolbachia DNA, we produced two draft genomes of wApol. Annotation of wApol highlights presence of a biotin operon, which is incomplete in many sequenced Wolbachia genomes.

conclusionsThe present study highlights at least two symbiont acquisition events among pseudoscorpion species. Phylogenomic analysis indicates that the Wolbachia from Atemnus politus (wApol), forms a separate supergroup ("S") with the Wolbachia from Cordylochernes scorpioides (wCsco). Interestingly, the biotin operon, present in wApol, appears to have been horizontally transferred multiple times along Wolbachia evolutionary history.

Indexed as

AnimalsArachnidaBiotinGene Transfer, HorizontalGenome, BacterialGenome SizeMolecular Sequence AnnotationMultilocus Sequence TypingOperonPhylogenySymbiosisWhole Genome SequencingWolbachiaBiotinBiotinGenomicsPseudoscorpionSymbiosisTarget enrichmentWolbachia

Identifiers

PMID32605600
PMCPMC7325362
OpenAlexW3040303876

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.