Evidence map›Paper›PMID 32602003›Full record

ArticlePathology oncology research : POR2020

Landscape of RAS Variations in 17,993 Pan-cancer Patients Identified by Next-generation Sequencing.

Shaoqiang Zhou, Ding Zhang, Junjie Li, Jing Zhao, Guoqiang Wang, Yuzi Zhang, Yuezong Bai, Dedian Chen, Hao Wu

Abstract readLetter
PubMed Publisher
In one paragraph

Article in Pathology oncology research : POR, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Landscape ofAnnals of translational medicine · 2022
    Article
  5. Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shaoqiang ZhouGalactophore Department, The Third Affiliated Hospital of Kunming Medical University (Yunnan Tumor Hospital) , No.518 Kunzhou Road, Yunnan Province, 650118, Kunming, China.
Ding ZhangThe Medical Department, 3D Medicines Inc, Shanghai, China.
Junjie LiDepartment of Anesthesiology, The Central Hospital of Zibo, Zibo, China.
Jing ZhaoThe Medical Department, 3D Medicines Inc, Shanghai, China.
Guoqiang WangThe Medical Department, 3D Medicines Inc, Shanghai, China.
Yuzi ZhangThe Medical Department, 3D Medicines Inc, Shanghai, China.
Yuezong BaiThe Medical Department, 3D Medicines Inc, Shanghai, China.
Dedian ChenGalactophore Department, The Third Affiliated Hospital of Kunming Medical University (Yunnan Tumor Hospital) , No.518 Kunzhou Road, Yunnan Province, 650118, Kunming, China. chendedian2006@126.com.
Hao WuDepartment of Oncology, The First Affiliated Hospital of Nanjing Medical University, NO.300 Guangzhou Road, Nanjing, Jiangsu Province, 210029, China. whdactor@163.com.
Kunming Medical University · CNCentral Hospital of Zibo · CNJiangsu Province Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RAS family genes (HRAS, KRAS and NRAS) were frequently observed in several tumors. The expression of constitutively active RAS proteins mediated by RAS variations promote the development of tumors. KRAS is an important prognostic and drug resistance biomarker. It would also be a promising drug target. Several trials which evaluating the efficacy of RAS G12C inhibitor in solid tumors are initiated. Herein, we analyzed the alterations status of KRAS/NRAS/HRAS across diverse solid tumors. The sing nucleotide variants (SNV) and copy number variants (CNV) data of 17993 Chinese patients from 22 types of cancer were obtained in our database. Genomic profiling of DNA was performed through a next-generation sequencing on tissue. Only the pathogenic mutations and likely pathogenic mutations in clinical significance were rolled into our analysis. Among 17993 pan-cancer patients, the total RAS variants frequency was 22.58%. KRAS was the most frequently altered, followed by NRAS and HRAS. For the SNV, KRAS were most commonly found in pancreas cancer, intestine cancer and colorectal cancer. Further analysis among KRAS SNV patients showed that the mutation frequency of KRAS G12C, G12D, G12R, and G12V was 1.81%, 6.81%, 0.69% and 4.25%, respectively. A total of 21 in 22 types of solid tumors had KRAS G12C/D/R/V pathogenic or likely pathogenic mutation, which occurred most frequently in colorectal cancer, pancreas cancer and lung cancer. Our results suggested that a variety of solid tumors may harbor KRAS G12C/D/R/V mutation. These patients may benefit from KRAS inhibitors.

Indexed as

MutationAdolescentAdultAgedAged, 80 and overBiomarkers, TumorChildChild, PreschoolFemaleFollow-Up StudiesHigh-Throughput Nucleotide SequencingHumansInfantMaleMiddle AgedNeoplasmsBiomarkers, Tumorras ProteinsCarcinomaGeneticsNext-generation sequencingRAS gene

Identifiers

PMID32602003
OpenAlexW3037018569

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.