Evidence map›Paper›PMID 32601391›Full record

ArticleNature ecology & evolution2020

Birth of a pathway for sulfur metabolism in early amniote evolution.

Marco Malatesta, Giulia Mori, Domenico Acquotti, Barbara Campanini, Alessio Peracchi, Parker B Antin, Riccardo Percudani

Open access · greenAbstract read
In one paragraph

Article in Nature ecology & evolution, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Marco MalatestaDepartment of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy.
Giulia MoriDepartment of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy.
Domenico AcquottiCentro Interdipartimentale Misure 'Giuseppe Casnati', University of Parma, Parma, Italy.
Barbara CampaniniDepartment of Food and Drug, University of Parma, Parma, Italy.
Alessio PeracchiDepartment of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy.
Parker B AntinDepartment of Cellular and Molecular Medicine, University of Arizona, Tucson, AZ, USA.
Riccardo PercudaniDepartment of Chemistry, Life Sciences and Environmental Sustainability, University of Parma, Parma, Italy. riccardo.percudani@unipr.it.ORCID http://orcid.org/0000-0001-8452-1062
University of Parma · ITUniversity of Arizona · US

Funding

Tech Development CoreP41HD088362 · NICHD · UNIVERSITY OF ARIZONA · PI ANTIN, PARKER BRUCE · 2017 to 2021
$3.2M
NICHD NIH HHS P41 HD088362
6 · The paper itself

Abstract

Among amniotes, reptiles and mammals are differently adapted to terrestrial life. It is generally appreciated that terrestrialization required adaptive changes of vertebrate metabolism, particularly in the mode of nitrogen excretion. However, the current paradigm is that metabolic adaptation to life on land did not involve synthesis of enzymatic pathways de novo, but rather repurposing of existing ones. Here, by comparing the inventory of pyridoxal 5'-phosphate-dependent enzymes in different amniotes, we identify in silico a pathway for sulfur metabolism present in chick embryos but not in mammals. Cysteine lyase contains haem and pyridoxal 5'-phosphate co-factors and converts cysteine and sulfite into cysteic acid and hydrogen sulfide, respectively. A specific cysteic acid decarboxylase produces taurine, while hydrogen sulfide is recycled into cysteine by cystathionine beta-synthase. This reaction sequence enables the formation of sulfonated amino acids during embryo development in the egg at no cost of reduced sulfur. The pathway originated around 300 million years ago in a proto-reptile by cystathionine beta-synthase duplication, cysteine lyase neofunctionalization and cysteic acid decarboxylase co-option. Our findings indicate that adaptation to terrestrial life involved innovations in metabolic pathways, and reveal the molecular mechanisms by which such innovations arose in amniote evolution.

Indexed as

Cystathionine gamma-LyaseHydrogen SulfideAnimalsChick EmbryoCystathionine beta-SynthaseCysteineSulfurCystathionine beta-SynthaseCystathionine gamma-LyaseCysteineHydrogen SulfideSulfur

Identifiers

PMID32601391
PMCPMC8364350
OpenAlexW3039011427

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.