Evidence map›Paper›PMID 32601197›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Oral squamous cell carcinoma diagnosed from saliva metabolic profiling.

Xiaowei Song, Xihu Yang, Rahul Narayanan, Vishnu Shankar, Sathiyaraj Ethiraj, Xiang Wang, Ning Duan, Yan-Hong Ni, Qingang Hu, Richard N Zare

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 79 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
79citing papers in PubMed, 3 pooled it
8.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

79 citing papers in PubMed, 3 syntheses or guidelines pooled it, 162 citations in OpenAlex.

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19 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Xiaowei SongDepartment of Chemistry, Fudan University, 200438 Shanghai, China.ORCID 0000-0003-3611-2816
Xihu YangDepartment of Oral and Maxillofacial Surgery, Nanjing Stomatological Hospital, Medical School of Nanjing University, 210000 Nanjing, Jiangsu, China.ORCID 0000-0002-4443-0534
Rahul NarayananDepartment of Chemistry, Fudan University, 200438 Shanghai, China.
Vishnu ShankarDepartment of Chemistry, Stanford University, Stanford, CA 94305.
Sathiyaraj EthirajDepartment of Chemistry, Fudan University, 200438 Shanghai, China.
Xiang WangDepartment of Oral and Maxillofacial Surgery, Nanjing Stomatological Hospital, Medical School of Nanjing University, 210000 Nanjing, Jiangsu, China.
Ning DuanDepartment of Oral and Maxillofacial Surgery, Nanjing Stomatological Hospital, Medical School of Nanjing University, 210000 Nanjing, Jiangsu, China.
Yan-Hong NiCentral Laboratory of Stomatology, Nanjing Stomatological Hospital, Medical School of Nanjing University, 210000 Nanjing, Jiangsu, China.ORCID 0000-0002-3890-3884
Qingang HuDepartment of Oral and Maxillofacial Surgery, Nanjing Stomatological Hospital, Medical School of Nanjing University, 210000 Nanjing, Jiangsu, China; qghu@nju.edu.cn rnz@stanford.edu.
Richard N ZareDepartment of Chemistry, Fudan University, 200438 Shanghai, China; qghu@nju.edu.cn rnz@stanford.edu.ORCID 0000-0001-5266-4253
Nanjing University · CNFudan University · CNStanford University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Saliva is a noninvasive biofluid that can contain metabolite signatures of oral squamous cell carcinoma (OSCC). Conductive polymer spray ionization mass spectrometry (CPSI-MS) is employed to record a wide range of metabolite species within a few seconds, making this technique appealing as a point-of-care method for the early detection of OSCC. Saliva samples from 373 volunteers, 124 who are healthy, 124 who have premalignant lesions, and 125 who are OSCC patients, were collected for discovering and validating dysregulated metabolites and determining altered metabolic pathways. Metabolite markers were reconfirmed at the primary tissue level by desorption electrospray ionization MS imaging (DESI-MSI), demonstrating the reliability of diagnoses based on saliva metabolomics. With the aid of machine learning (ML), OSCC and premalignant lesions can be distinguished from the normal physical condition in real time with an accuracy of 86.7%, on a person by person basis. These results suggest that the combination of CPSI-MS and ML is a feasible tool for accurate, automated diagnosis of OSCC in clinical practice.

Indexed as

MetabolomicsAdultAgedBiomarkers, TumorCarcinoma, Squamous CellFemaleHumansMachine LearningMaleMiddle AgedMouth NeoplasmsNeoplasm StagingPoint-of-Care TestingReproducibility of ResultsSalivaSpectrometry, Mass, Electrospray IonizationBiomarkers, Tumorconducting polymer spray ionizationnoninvasive diagnosisoral squamous cell carcinomapoint-of-care testsalivary metabolomics

Identifiers

PMID32601197
PMCPMC7368296
OpenAlexW3038741958

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.