Evidence map›Paper›PMID 32601156›Full record

ArticleAntimicrobial agents and chemotherapy2020

Genomic Profiling of Evolving Daptomycin Resistance in a Patient with Recurrent Staphylococcus argenteus Sepsis.

Samantha Hao, Mazin Abdelghany, Amy Lyden, Rene Sit, Michelle Tan, Cristina M Tato, Joseph L DeRisi, Steve Miller, Sarah B Doernberg, Charles Langelier

Open access · greenAbstract readCase Reports
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.2field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Accurately IdentifyingDiagnostics (Basel, Switzerland) · 2026
    Article
  2. Article
  3. Review
  4. TheJournal of clinical microbiology · 2025
    Review
  5. TheJournal of clinical microbiology · 2025
    Review
  6. Emergence ofVirulence · 2024
    Article
  7. In host evolution of beta lactam resistance during active treatment forFrontiers in cellular and infection microbiology · 2023
    Article
  8. First Report of a Methicillin-Resistant, High-Level Mupirocin-ResistantFrontiers in cellular and infection microbiology · 2022
    Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Samantha Hao *Chan Zuckerberg Biohub, San Francisco, California, USA.ORCID 0000-0002-4349-8131
Mazin Abdelghany *Division of Infectious Diseases, Department of Medicine, University of California San Francisco, San Francisco, California, USA.
Amy LydenChan Zuckerberg Biohub, San Francisco, California, USA.
Rene SitChan Zuckerberg Biohub, San Francisco, California, USA.
Michelle TanChan Zuckerberg Biohub, San Francisco, California, USA.
Cristina M TatoChan Zuckerberg Biohub, San Francisco, California, USA.
Joseph L DeRisiChan Zuckerberg Biohub, San Francisco, California, USA.ORCID 0000-0002-4611-9205
Steve MillerDepartment of Biochemistry and Biophysics, University of California San Francisco, San Francisco, California, USA.ORCID 0000-0002-9188-3392
Sarah B DoernbergDivision of Infectious Diseases, Department of Medicine, University of California San Francisco, San Francisco, California, USA.
Charles LangelierChan Zuckerberg Biohub, San Francisco, California, USA chaz.langelier@ucsf.edu.ORCID 0000-0002-6708-4646
Chan Zuckerberg Initiative (United States) · USUniversity of California, San Francisco · US

Funding

Profiling the Lung Transcriptome for Precision Diagnosis of Respiratory Infections using Host/Pathogen Metagenomic SequencingK23HL138461 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LANGELIER, CHARLES · 2018 to 2021
$718k
NHLBI NIH HHS K23 HL138461
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

DaptomycinDrug Resistance, BacterialSepsisStaphylococcal InfectionsAnti-Bacterial AgentsBacterial ProteinsGenomicsHumansMicrobial Sensitivity TestsStaphylococcusAnti-Bacterial AgentsBacterial ProteinsDaptomycinantimicrobial resistanceantimicrobial stewardshipStaphylococcusStaphylococcus argenteuswhole-genome sequencing

Identifiers

PMID32601156
PMCPMC7508626
OpenAlexW3038678185

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.