Evidence map›Paper›PMID 32600419›Full record

ArticleBMC plant biology2020

Putative alternative translation start site-encoding nucleotides of CPR5 regulate growth and resistance.

Muhammad B Faisal, Tsanko S Gechev, Bernd Mueller-Roeber, Paul P Dijkwel

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Frontiers in microbiology · 2026
    Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

Muhammad B FaisalSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand.ORCID https://orcid.org/0000-0003-1041-1439
Tsanko S GechevCenter of Plant Systems Biology and Biotechnology, 4000, Plovdiv, Bulgaria.ORCID https://orcid.org/0000-0002-3328-0243
Bernd Mueller-RoeberCenter of Plant Systems Biology and Biotechnology, 4000, Plovdiv, Bulgaria.ORCID https://orcid.org/0000-0002-1410-464X
Paul P DijkwelSchool of Fundamental Sciences, Massey University, Palmerston North, New Zealand. p.dijkwel@massey.ac.nz.ORCID https://orcid.org/0000-0002-1432-2209
Massey University · NZCenter of Plant Systems Biology and Biotechnology · BGUniversity of Potsdam · DE

Funding

EU FP7-IRSES 612630European Regional Development Fund BG05M2OP001-1.003-001-C01Higher Education Commission, Pakistan N/AHorizon 2020 Research and Innovation SGA-CSA No.739582 and FPA No. 664620RSNZ-IRSES 612630
6 · The paper itself

Abstract

backgroundThe Arabidopsis CONSTITUTIVE EXPRESSER of PATHOGENESIS-RELATED GENES 5 (CPR5) has recently been shown to play a role in gating as part of the nuclear pore complex (NPC). Mutations in CPR5 cause multiple defects, including aberrant trichomes, reduced ploidy levels, reduced growth and enhanced resistance to bacterial and fungal pathogens. The pleiotropic nature of cpr5 mutations implicates that the CPR5 protein affects multiple pathways. However, little is known about the structural features that allow CPR5 to affect the different pathways.

resultsOur in silico studies suggest that in addition to three clusters of putative nuclear localization signals and four or five transmembrane domains, CPR5 contains two putative alternative translation start sites. To test the role of the methionine-encoding nucleotides implicated in those sites, metCPR5 cDNAs, in which the relevant nucleotides were changed to encode glutamine, were fused to the CPR5 native promoter and the constructs transformed to cpr5-2 plants to complement cpr5-compromised phenotypes. The control and metCPR5 constructs were able to complement all cpr5 phenotypes, although the extent of complementation depended on the specific complementing plant lines. Remarkably, plants transformed with metCPR5 constructs showed larger leaves and displayed reduced resistance when challenged to Pseudomonas syringae pv Pst DC3000, as compared to control plants. Thus, the methionine-encoding nucleotides regulate growth and resistance. We propose that structural features of the CPR5 N-terminus are implicated in selective gating of proteins involved in regulating the balance between growth and resistance.

conclusionPlants need to carefully balance the amount of resources used for growth and resistance. The Arabidopsis CPR5 protein regulates plant growth and immunity. Here we show that N-terminal features of CPR5 are involved in the regulation of the balance between growth and resistance. These findings may benefit efforts to improve plant yield, while maintaining optimal levels of disease resistance.

Indexed as

Peptide Chain Initiation, TranslationalArabidopsisArabidopsis ProteinsComputer SimulationDisease ResistanceMembrane ProteinsMutagenesisNucleotidesPlant DiseasesPlant LeavesPlants, Genetically ModifiedPloidiesPromoter Regions, GeneticPseudomonas syringaeArabidopsis ProteinsCPR5 protein, ArabidopsisMembrane ProteinsNucleotidesArabidopsis thalianaCell deathCPR5Disease resistanceEndoreduplicationPlant growth

Identifiers

PMID32600419
PMCPMC7322872
OpenAlexW3037317226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.