Evidence map›Paper›PMID 32599860›Full record

ArticleGenes2020

Sequence Composition Underlying Centromeric and Heterochromatic Genome Compartments of the Pacific Oyster

Monika Tunjić Cvitanić, Tanja Vojvoda Zeljko, Juan J Pasantes, Daniel García-Souto, Tena Gržan, Evelin Despot-Slade, Miroslav Plohl, Eva Šatović

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Satellite DNA Genomics: The Ongoing Story.International journal of molecular sciences · 2025
    Review
  2. Article
  3. Article
  4. Review
  5. Satellitome Analysis of the Pacific OysterInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Monika Tunjić CvitanićDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.
Tanja Vojvoda ZeljkoDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.
Juan J PasantesDepartamento de Bioquímica, Xenética e Inmunoloxía, Centro de Investigación Mariña (CIM), Universidade de Vigo, 36310 Vigo, Spain.ORCID 0000-0001-6515-3946
Daniel García-SoutoDepartamento de Bioquímica, Xenética e Inmunoloxía, Centro de Investigación Mariña (CIM), Universidade de Vigo, 36310 Vigo, Spain.ORCID 0000-0002-0997-8799
Tena GržanDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.
Evelin Despot-SladeDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.ORCID 0000-0002-2494-0721
Miroslav PlohlDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.
Eva ŠatovićDivision of Molecular Biology, Ruđer Bošković Institute, Bijenička cesta 54, 10000 Zagreb, Croatia.ORCID 0000-0002-5570-4238
Ruđer Bošković Institute · HRUniversidade de Santiago de Compostela · ESUniversidade de Vigo · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Segments of the genome enriched in repetitive sequences still present a challenge and are omitted in genome assemblies. For that reason, the exact composition of DNA sequences underlying the heterochromatic regions and the active centromeres are still unexplored for many organisms. The centromere is a crucial region of eukaryotic chromosomes responsible for the accurate segregation of genetic material. The typical landmark of centromere chromatin is the rapidly-evolving variant of the histone H3, CenH3, while DNA sequences packed in constitutive heterochromatin are associated with H3K9me3-modified histones. In the Pacific oyster

Indexed as

AnimalsCentromereChromatinChromatin ImmunoprecipitationDNA Transposable ElementsGenomeHeterochromatinHistonesOstreidaePacific OceanChromatinDNA Transposable ElementsHeterochromatinHistonesBivalvesCenH3centromerechromatin immunoprecipitationCrassostrea gigasH3K9me3heterochromatinrepetitive DNA

Identifiers

PMID32599860
PMCPMC7348941
OpenAlexW3037178592

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.