Evidence map›Paper›PMID 32599173›Full record

ArticleTravel medicine and infectious disease

Nosocomial outbreak of the Middle East Respiratory Syndrome coronavirus: A phylogenetic, epidemiological, clinical and infection control analysis.

Mazin Barry, My Vt Phan, Layan Akkielah, Fahad Al-Majed, Abdulkarim Alhetheel, Ali Somily, Sarah Suliman Alsubaie, Scott Jn McNabb, Matthew Cotten, Alimuddin Zumla and 1 more

Open access · greenAbstract read
In one paragraph

Article in Travel medicine and infectious disease. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 30 citations in OpenAlex.

  1. Epidemiological Characteristics of MERS-CoV Human Cases, 2012- 2025.Journal of epidemiology and global health · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 4 countries.

Mazin BarryInfectious Diseases Division, Faculty of Medicine, King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia. Electronic address: mbarry@ksu.edu.sa.
My Vt PhanVirus Genomics, Wellcome Trust Sanger Institute, Hinxton, United Kingdom. Electronic address: mp21@sanger.ac.uk.
Layan AkkielahDepartment of Internal Medicine, King Khalid University Hospital, Riyadh, Saudi Arabia. Electronic address: layan.ak0@gmail.com.
Fahad Al-MajedInfectious Diseases Division, Faculty of Medicine, King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia. Electronic address: almajid@ksu.edu.sa.
Abdulkarim AlhetheelDivision of Microbiology, Faculty of Medicine, King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia. Electronic address: aalhetheel@ksu.edu.sa.
Ali SomilyDivision of Microbiology, Faculty of Medicine, King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia. Electronic address: ali.somily@gmail.com.
Sarah Suliman AlsubaieDivision of Pediatric Infectious Diseases, Faculty of Medicine, King Khalid University Hospital, King Saud University, Riyadh, Saudi Arabia. Electronic address: salsubaie@ksu.edu.sa.
Scott Jn McNabbEmory University, Rollins School of Public Health, Atlanta, GA, USA. Electronic address: scottjnmcnabb@emory.edu.
Matthew CottenMRC/UVRI & LSHTM Uganda Research Unit, Entebbe, Uganda; MRC-University of Glasgow Centre for Virus Research, Glasgow, UK. Electronic address: Matthew.Cotten@lshtm.ac.uk.
Alimuddin ZumlaDivision of Infection and Immunity, Center for Clinical Microbiology, University College London, UK; National Institute of Health Research Biomedical Research Centre at UCL Hospitals, London, UK. Electronic address: a.i.zumla@gmail.com.
Ziad A MemishSenior Infectious Diseases Consultant & Director Research & Innovation Center, King Saud Medical City, Ministry of Health, Riyadh, Saudi Arabia; Faculty of Medicine, Alfaisal University, Riyadh, Saudi Arabia; Hubert Department of Global Health, Rollins School of Public Health, Emory University, Atlanta, GA, USA. Electronic address: zmemish@yahoo.com.
King Saud University · SAAlfaisal University · SAEmory University · USKing Khalid University Hospital · SAMRC University of Glasgow Centre for Virus Research · GBNational Institute for Health Research · GBWellcome Sanger Institute · GB

Funding

Medical Research Council MC_UU_12014/12Wellcome Trust
6 · The paper itself

Abstract

backgroundMiddle East Respiratory Syndrome coronavirus (MERS-CoV) continues to cause intermittent community and nosocomial outbreaks. Obtaining data on specific source(s) and transmission dynamics of MERS-CoV during nosocomial outbreaks has been challenging. We performed a clinical, epidemiological and phylogenetic investigation of an outbreak of MERS-CoV at a University Hospital in Riyadh, Kingdom of Saudi Arabia.

methodsClinical, epidemiological and infection control data were obtained from patients and Healthcare workers (HCWs). Full genome sequencing was conducted on nucleic acid extracted directly from MERS-CoV PCR-confirmed clinical samples and phylogenetic analysis performed. Phylogenetic analysis combined with published MERS-CoV genomes was performed. HCWs compliance with infection control practices was also assessed.

resultsOf 235 persons investigated, there were 23 laboratory confirmed MERS cases, 10 were inpatients and 13 HCWs. Eight of 10 MERS inpatients died (80% mortality). There were no deaths among HCWs. The primary index case assumed from epidemiological investigation was not substantiated phylogenetically. 17/18 MERS cases were linked both phylogenetically and epidemiologically. One asymptomatic HCW yielded a MERS-CoV genome not directly linked to any other case in the investigation. Five HCWs with mild symptoms yielded >75% full MERS-CoV genome sequences. HCW compliance with use of gowns was 62.1%, gloves 69.7%, and masks 57.6%.

conclusionsSeveral factors and sources, including a HCW MERS-CoV 'carrier phenomenon', occur during nosocomial MERS-CoV outbreaks. Phylogenetic analyses of MERS-CoV linked to clinical and epidemiological information is essential for outbreak investigation. The specific role of apparently healthy HCWs in causing nosocomial outbreaks requires further definition.

Indexed as

Disease OutbreaksInfection ControlCoronavirus InfectionsCross InfectionGenome, ViralHealth PersonnelHospitals, UniversityHumansMiddle East Respiratory Syndrome CoronavirusPhylogenySaudi ArabiaEpidemiologyHealthcare workersMERS-CoV carrier phenomenonMiddle east respiratory syndromeNosocomialOutbreakPhylogenetics

Identifiers

PMID32599173
PMCPMC7319941
OpenAlexW3037822283

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.