Evidence map›Paper›PMID 32597507›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2020

Oak-Associated Negativicute Equipped with Ancestral Aromatic Polyketide Synthase Produces Antimycobacterial Dendrubins.

Keishi Ishida, Gulimila Shabuer, Sebastian Schieferdecker, Sacha J Pidot, Timothy P Stinear, Uwe Knuepfer, Michael Cyrulies, Christian Hertweck

Abstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Keishi IshidaBiomolecular Chemistry, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.
Gulimila ShabuerBiomolecular Chemistry, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.
Sebastian SchieferdeckerBiomolecular Chemistry, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.
Sacha J PidotDepartment of Microbiology and Immunology, University of Melbourne, 792 Elizabeth Street, 3000, Melbourne, Australia.
Timothy P StinearDepartment of Microbiology and Immunology, University of Melbourne, 792 Elizabeth Street, 3000, Melbourne, Australia.
Uwe KnuepferBiopilot Plant, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.
Michael CyruliesBiopilot Plant, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.
Christian HertweckBiomolecular Chemistry, Leibniz Institute for Natural Products Chemistry and Infection Biology, Beutenbergstr. 11a, 07745, Jena, Germany.ORCID http://orcid.org/0000-0002-0367-337X

Funding

Bundesministerium für Bildung und Forschung InfectControlNational Health and Medical Research Concil GNT1105522
6 · The paper itself

Abstract

Anaerobic bacteria have only recently been recognized as a source of antibiotics; yet, the metabolic potential of Negativicutes (Gram-negative staining Firmicutes) such as the oak-associated Dendrosporobacter quercicolus has remained unknown. Genome mining of D. quercicolus and phylogenetic analyses revealed a gene cluster for a type II polyketide synthase (PKS) complex that belongs to the most ancestral enzyme systems of this type. Metabolic profiling, NMR analyses, and stable-isotope labeling led to the discovery of a new family of anthraquinone-type polyphenols, the dendrubins, which are diversified by acylation, methylation, and dimerization. Dendrubin A and B were identified as strong antibiotics against a range of clinically relevant, human-pathogenic mycobacteria.

Indexed as

Polyketide SynthasesQuercusAnti-Bacterial AgentsBacillotaHumansMultigene FamilyPhylogenyAnti-Bacterial AgentsPolyketide Synthasesanaerobesantibioticsgenome miningmycobacteriapolyphenols

Identifiers

PMID32597507
PMCPMC7693217

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.