Evidence map›Paper›PMID 32594240›Full record

ArticleHuman genetics2020

The cataract-linked RNA-binding protein Celf1 post-transcriptionally controls the spatiotemporal expression of the key homeodomain transcription factors Pax6 and Prox1 in lens development.

Sandeep Aryal, Justine Viet, Bailey A T Weatherbee, Archana D Siddam, Francisco G Hernandez, Carole Gautier-Courteille, Luc Paillard, Salil A Lachke

Open access · greenAbstract read
In one paragraph

Article in Human genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 2 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 2 syntheses or guidelines pooled it, 25 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Sandeep AryalDepartment of Biological Sciences, University of Delaware, Newark, DE, 19716, USA.
Justine VietInstitut de Génétique et Développement de Rennes, Univ Rennes, CNRS, IGDR-UMR 6290, 35000, Rennes, France.
Bailey A T WeatherbeeDepartment of Biological Sciences, University of Delaware, Newark, DE, 19716, USA.
Archana D SiddamDepartment of Biological Sciences, University of Delaware, Newark, DE, 19716, USA.
Francisco G HernandezDepartment of Biological Sciences, University of Delaware, Newark, DE, 19716, USA.
Carole Gautier-CourteilleInstitut de Génétique et Développement de Rennes, Univ Rennes, CNRS, IGDR-UMR 6290, 35000, Rennes, France.
Luc PaillardInstitut de Génétique et Développement de Rennes, Univ Rennes, CNRS, IGDR-UMR 6290, 35000, Rennes, France. luc.paillard@univ-rennes1.fr.
Salil A LachkeDepartment of Biological Sciences, University of Delaware, Newark, DE, 19716, USA. salil@udel.edu.ORCID http://orcid.org/0000-0001-8845-010X
University of Delaware · USCentre National de la Recherche Scientifique · FR

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI Shawn W Polson · 2012 to 2026
$67.2M
POST TRANSCRIPTIONAL CONTROL OF GENE EXPRESSION IN THE LENS (LENS GENE EXPRESSIONR01EY021505 · NEI · WASHINGTON UNIVERSITY · PI LACHKE, SALIL · 2011 to 2024
$5.3M
RNA-binding proteins in early eye development.R01EY029770 · NEI · UNIVERSITY OF DELAWARE · PI LACHKE, SALIL · 2019 to 2023
$1.7M
Acquisition of a Zeiss LSM710 Confocal MicroscopeS10RR027273 · NCRR · UNIVERSITY OF DELAWARE · PI DUNCAN, MELINDA K · 2010 to 2010
$494k
Fight for Sight Summer Student FellowshipNCRR NIH HHS S10 RR027273NEI NIH HHS R01 EY021505NEI NIH HHS R01 EY029770NIGMS NIH HHS P20 GM103446NIH HHS 1S10 RR027273NIH HHS P20 GM103446NIH HHS R01 EY021505NIH HHS R01 EY029770Sigma Xi Grant in Aid
6 · The paper itself

Abstract

The homeodomain transcription factors (TFs) Pax6 (OMIM: 607108) and Prox1 (OMIM: 601546) critically regulate gene expression in lens development. While PAX6 mutations in humans can cause cataract, aniridia, microphthalmia, and anophthalmia, among other defects, Prox1 deletion in mice causes severe lens abnormalities, in addition to other organ defects. Furthermore, the optimal dosage/spatiotemporal expression of these key TFs is essential for development. In lens development, Pax6 expression is elevated in cells of the anterior epithelium compared to fiber cells, while Prox1 exhibits the opposite pattern. Whether post-transcriptional regulatory mechanisms control these precise TF expression patterns is unknown. Here, we report the unprecedented finding that the cataract-linked RNA-binding protein (RBP), Celf1 (OMIM: 601074), post-transcriptionally regulates Pax6 and Prox1 protein expression in lens development. Immunostaining shows that Celf1 lens-specific conditional knockout (Celf1

Indexed as

AnimalsCataractCELF1 ProteinCell DifferentiationEpithelial CellsEye ProteinsGene Expression Regulation, DevelopmentalHomeodomain ProteinsHumansLens, CrystallineMiceMice, KnockoutPAX6 Transcription FactorProspero-Related Homeobox 1 ProteinRNA-Binding ProteinsTumor Suppressor ProteinsCELF1 ProteinEye ProteinsHomeodomain ProteinsPAX6 Transcription FactorProspero-Related Homeobox 1 ProteinRNA-Binding ProteinsTumor Suppressor Proteins

Identifiers

PMID32594240
PMCPMC7572558
OpenAlexW3037040376

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.