Evidence map›Paper›PMID 32591801›Full record

ArticleThe Journal of antimicrobial chemotherapy2020

Discovery and characterization of New Delhi metallo-β-lactamase-1 inhibitor peptides that potentiate meropenem-dependent killing of carbapenemase-producing Enterobacteriaceae.

Misha I Kazi, Blair W Perry, Daren C Card, Richard D Schargel, Hana B Ali, Victor C Obuekwe, Madhab Sapkota, Katie N Kang, Mark W Pellegrino, David E Greenberg and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of antimicrobial chemotherapy, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 1 country.

Misha I KaziDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Blair W PerryDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Daren C CardDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Richard D SchargelDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Hana B AliDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Victor C ObuekweDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Madhab SapkotaDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Katie N KangDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Mark W PellegrinoDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
David E GreenbergDepartment of Internal Medicine, University of Texas Southwestern Medical Center, Dallas, TX, USA.
Todd A CastoeDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
Joseph M BollDepartment of Biology, University of Texas at Arlington, Arlington, TX, USA.
The University of Texas at Arlington · USThe University of Texas Southwestern Medical Center · US

Funding

Development of Gene-Silencing Therapeutics for Pseudomonas aeruginosaR01AI141101 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI GREENBERG, DAVID ELIHU · 2019 to 2024
$5.7M
Schistosomiasis at the edge of elimination: characterizing sources of new infections in residual transmission hotspotsR01AI134673 · NIAID · UNIVERSITY OF COLORADO DENVER · PI CARLTON, ELIZABETH · 2019 to 2023
$3.5M
Mechanisms of host protection during infection via the mitochondrial unfolded protein responseR35GM128885 · NIGMS · UNIVERSITY OF TEXAS ARLINGTON · PI Mark Watson Pellegrino · 2018 to 2026
$3.0M
Circumventing Antibiotic Resistance with Novel Gene-Silencing TherapeuticsR33AI111753 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI GELLER, BRUCE L, GREENBERG, DAVID ELIHU · 2016 to 2018
$1.4M
Circumventing Antibiotic Resistance with Novel Gene-Silencing TherapeuticsR21AI111753 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI GELLER, BRUCE L, GREENBERG, DAVID ELIHU · 2014 to 2015
$415k
Solving a Multidrug Resistance Puzzle: Complete Loss of LipooligosaccharideR21AI146829 · NIAID · UNIVERSITY OF TEXAS ARLINGTON · PI BOLL, JOSEPH MICHAEL · 2019 to 2020
$391k
NIAID NIH HHS R01 AI134673NIAID NIH HHS R01 AI141101NIAID NIH HHS R21 AI111753NIAID NIH HHS R21 AI146829NIAID NIH HHS R33 AI111753NIGMS NIH HHS R35 GM128885
6 · The paper itself

Abstract

objectivesMetallo-β-lactamases (MBLs) are an emerging class of antimicrobial resistance enzymes that degrade β-lactam antibiotics, including last-resort carbapenems. Infections caused by carbapenemase-producing Enterobacteriaceae (CPE) are increasingly prevalent, but treatment options are limited. While several serine-dependent β-lactamase inhibitors are formulated with commonly prescribed β-lactams, no MBL inhibitors are currently approved for combinatorial therapies. New compounds that target MBLs to restore carbapenem activity against CPE are therefore urgently needed. Herein we identified and characterized novel synthetic peptide inhibitors that bound to and inhibited NDM-1, which is an emerging β-lactam resistance mechanism in CPE.

methodsWe leveraged Surface Localized Antimicrobial displaY (SLAY) to identify and characterize peptides that inhibit NDM-1, which is a primary carbapenem resistance mechanism in CPE. Lead inhibitor sequences were chemically synthesized and MBCs and MICs were calculated in the presence/absence of carbapenems. Kinetic analysis with recombinant NDM-1 and select peptides tested direct binding and supported NDM-1 inhibitor mechanisms of action. Inhibitors were also tested for cytotoxicity.

resultsWe identified approximately 1700 sequences that potentiated carbapenem-dependent killing against NDM-1 Escherichia coli. Several also enhanced meropenem-dependent killing of other CPE. Biochemical characterization of a subset indicated the peptides penetrated the bacterial periplasm and directly bound NDM-1 to inhibit enzymatic activity. Additionally, each demonstrated minimal haemolysis and cytotoxicity against mammalian cell lines.

conclusionsOur approach advances a molecular platform for antimicrobial discovery, which complements the growing need for alternative antimicrobials. We also discovered lead NDM-1 inhibitors, which serve as a starting point for further chemical optimization.

Indexed as

beta-LactamasesCarbapenem-Resistant EnterobacteriaceaeAnimalsAnti-Bacterial AgentsEnterobacteriaceaeKineticsMeropenemMicrobial Sensitivity TestsPeptidesAnti-Bacterial Agentsbeta-lactamase NDM-1beta-LactamasesMeropenemPeptides

Identifiers

PMID32591801
PMCPMC7556817
OpenAlexW3037351257

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.