Evidence map›Paper›PMID 32591422›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.

Chavdar Slavov, Tobias Fischer, Avishai Barnoy, Heewhan Shin, Aditya G Rao, Christian Wiebeler, Xiaoli Zeng, Yafang Sun, Qianzhao Xu, Alexander Gutt and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 42 citations in OpenAlex.

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  9. Influence of the PHY domain on the ms-photoconversion dynamics of a knotless phytochrome.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
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  10. Article
  11. Protein-chromophore interactions controlling photoisomerization in red/green cyanobacteriochromes.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  12. Light- and pH-dependent structural changes in cyanobacteriochrome AnPixJg2.Photochemical & photobiological sciences : Official journal of the European Photochemistry Association and the European Society for Photobiology · 2022
    Article
  13. Article
  14. Ultrafast Photoconversion Dynamics of the Knotless PhytochromeInternational journal of molecular sciences · 2021
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  17. Effect of the PHY Domain on the Photoisomerization Step of the Forward PChemistry (Weinheim an der Bergstrasse, Germany) · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 6 institutions in 4 countries.

Chavdar SlavovInstitute of Physical and Theoretical Chemistry, Goethe University, D-60438 Frankfurt, Germany; chslavov@theochem.uni-frankfurt.de xiaojing@uic.edu igor.schapiro@mail.huji.ac.il wveitl@theochem.uni-frankfurt.de.ORCID 0000-0001-9441-0243
Tobias FischerInstitute of Physical and Theoretical Chemistry, Goethe University, D-60438 Frankfurt, Germany.
Avishai BarnoyFritz Haber Center for Molecular Dynamics Research at the Institute of Chemistry, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.ORCID 0000-0001-9598-7044
Heewhan ShinDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.
Aditya G RaoFritz Haber Center for Molecular Dynamics Research at the Institute of Chemistry, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.ORCID 0000-0001-6771-9157
Christian WiebelerFritz Haber Center for Molecular Dynamics Research at the Institute of Chemistry, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.ORCID 0000-0003-1286-0860
Xiaoli ZengDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607.ORCID 0000-0001-7616-0535
Yafang SunKey State Laboratory of Agriculture Microbiology, Huazhong Agriculture University, 430070 Wuhan, China.
Qianzhao XuInstitute of Analytical Chemistry, University of Leipzig, D-04103 Leipzig, Germany.
Alexander GuttMax Planck Institute for Chemical Energy Conversion, D-45470 Mülheim an der Ruhr, Germany.
Kai-Hong ZhaoKey State Laboratory of Agriculture Microbiology, Huazhong Agriculture University, 430070 Wuhan, China.ORCID 0000-0003-1637-6187
Wolfgang GärtnerInstitute of Analytical Chemistry, University of Leipzig, D-04103 Leipzig, Germany.ORCID 0000-0002-6898-7011
Xiaojing YangDepartment of Chemistry, University of Illinois at Chicago, Chicago, IL 60607; chslavov@theochem.uni-frankfurt.de xiaojing@uic.edu igor.schapiro@mail.huji.ac.il wveitl@theochem.uni-frankfurt.de.ORCID 0000-0003-1394-9189
Igor SchapiroFritz Haber Center for Molecular Dynamics Research at the Institute of Chemistry, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel; chslavov@theochem.uni-frankfurt.de xiaojing@uic.edu igor.schapiro@mail.huji.ac.il wveitl@theochem.uni-frankfurt.de.ORCID 0000-0001-8536-6869
Josef WachtveitlInstitute of Physical and Theoretical Chemistry, Goethe University, D-60438 Frankfurt, Germany; chslavov@theochem.uni-frankfurt.de xiaojing@uic.edu igor.schapiro@mail.huji.ac.il wveitl@theochem.uni-frankfurt.de.ORCID 0000-0002-8496-8240
Hebrew University of Jerusalem · ILGoethe University Frankfurt · DEUniversity of Illinois Chicago · USHuazhong Agricultural University · CNMax Planck Institute for Chemical Energy Conversion · DELeipzig University · DE

Funding

Structures, Dynamics and Signaling Mechanisms of Modular PhotoreceptorsR01EY024363 · NEI · UNIVERSITY OF ILLINOIS AT CHICAGO · PI YANG, XIAOJING · 2014 to 2021
$2.9M
NEI NIH HHS R01 EY024363
6 · The paper itself

Abstract

Phytochromes are a diverse family of bilin-binding photoreceptors that regulate a wide range of physiological processes. Their photochemical properties make them attractive for applications in optogenetics and superresolution microscopy. Phytochromes undergo reversible photoconversion triggered by the

Indexed as

Bile PigmentsCrystallography, X-RayIsomerismKineticsModels, MolecularNostocPhotochemical ProcessesPhotoreceptors, MicrobialPhytochromeProtein ConformationSpectrum AnalysisStructure-Activity RelationshipBile PigmentsPhotoreceptors, MicrobialPhytochromeknotless phytochromephotoisomerizationQM/MMultrafast spectroscopyX-ray structure

Identifiers

PMID32591422
PMCPMC7368379
OpenAlexW3037238515

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.