Evidence map›Paper›PMID 32589879›Full record

ArticleThe Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases

Association between NDO-LID and PGL-1 for leprosy and class I and II human leukocyte antigen alleles in an indigenous community in Southwest Amazon.

Stéfanie Ferreira Teles, Eliane Aparecida Silva, Rodrigo Medeiros de Souza, Jane Tomimori, Marcos Cesar Florian, Rogério Oliveira Souza, Elaine Valim Camarinha Marcos, Fabiana Covolo de Souza-Santana, Mônica Antar Gamba

Open access · goldAbstract read
In one paragraph

Article in The Brazilian journal of infectious diseases : an official publication of the Brazilian Society of Infectious Diseases. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.1field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Stéfanie Ferreira TelesUniversidade Federal do Acre, Centro Multidisciplinar, Cruzeiro do Sul, AC, Brazil. Electronic address: stefanieftm@hotmail.com.
Eliane Aparecida SilvaInstituto Lauro de Souza Lima, Bauru/SP, Laboratório de Imunologia, Bauru, SP, Brazil.
Rodrigo Medeiros de SouzaUniversidade Federal do Acre, Centro Multidisciplinar, Laboratório de Imunologia e Microbiologia, Cruzeiro do Sul, AC, Brazil.
Jane TomimoriUniversidade Federal de São Paulo, Escola Paulista de Medicina, Departamento de Dermatologia, São Paulo, SP, Brazil.
Marcos Cesar FlorianUniversidade Federal de São Paulo, Escola Paulista de Medicina, Departamento de Dermatologia, São Paulo, SP, Brazil.
Rogério Oliveira SouzaUniversidade Federal do Acre, Centro Multidisciplinar, Cruzeiro do Sul, AC, Brazil.
Elaine Valim Camarinha MarcosInstituto Lauro de Souza Lima, Bauru/SP, Laboratório de Imunogenética, Bauru, SP, Brazil.
Fabiana Covolo de Souza-SantanaInstituto Lauro de Souza Lima, Bauru/SP, Laboratório de Imunogenética, Bauru, SP, Brazil.
Mônica Antar GambaUniversidade Federal de São Paulo, Escola Paulista de Enfermagem, Departamento de Saúde Coletiva, São Paulo, SP, Brazil.
Instituto Lauro de Souza Lima · BRUniversidade Federal de São Paulo · BRUniversidade Federal do Acre · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The frequencies of the Human leukocyte antigen (HLA) alleles in the Puyanawa indigenous reserve population and their association with the NDO-LID and ELISA PGL-1 rapid serological test was assessed. This was a cross-sectional study with an epidemiological clinical design conducted in two indigenous communities in the state of Acre, Brazil. Blood was collected in a tube with EDTA to identify HLA alleles and perform serological tests. DNA was obtained using the salting out procedure. The LabType™ technique (One-Lambda-USA) was used for HLA class I (loci A*, B* and C*) and II (loci DRB1*, DQA1* and DQB1*) typing. Allele frequency was obtained by direct count, and the chi-square test was used to assess the association with the NDO-LID and PGL-1 tests. The most frequent alleles in the two communities were: HLA-A*02:01, HLA-B*40:02, HLA-DRB1*16:02, HLA-DQA1*05:05 and HLA-DQB1*03:01. The allele HLA-C*04:01 was the most common in the Barão community, and the allele HLA-C*07:01 in Ipiranga. Among individuals who presented seropositivity to the NDO-LID test, the association with alleles HLA-A*02 (43.18% vs 24.8%, p=0.03, OR=2.35) and HLA-B*53 (6.83% vs 0.0%, p=0.03, OR=8.95) was observed in the Barão community. HLA-B*15 was associated with non-seroconversion to the NDO-LID test in Ipiranga. In both communities, HLA-B*40 and HLA-C*03 were associated with positive serological response to ELISA PGL-1. The HLA class I and II alleles most frequently found in this study have already been described among Terena indigenous groups, and HLA class I contributes to seroconversion to NDO-LID and PGL-1 tests in inhabitants of the Barão and Ipiranga communities.

Indexed as

LeprosyAllelesBrazilCross-Sectional StudiesGene FrequencyHLA-DRB1 ChainsHumansHLA-DRB1 ChainsClass II MHC genesClass I MHC genesHLALeprosyNursingSouth American indigenous populations

Identifiers

PMID32589879
PMCPMC9392080
OpenAlexW3037240918

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.