Evidence map›Paper›PMID 32587636›Full record

ArticleMobile DNA2020

Transposable element abundance correlates with mode of transmission in microsporidian parasites.

Nathalia Rammé Medeiros de Albuquerque, Dieter Ebert, Karen Luisa Haag

Open access · goldAbstract read
In one paragraph

Article in Mobile DNA, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 36 citations in OpenAlex.

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  11. Human follicular mites: Ectoparasites becoming symbionts.Molecular biology and evolution · 2022
    Article
  12. Transposable elements promote the evolution of genome streamlining.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2022
    Article
  13. Comparative Genomics of Microsporidia.Experientia supplementum (2012) · 2022
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Nathalia Rammé Medeiros de AlbuquerqueDepartment of Genetics and Post-Graduation Program of Genetics and Molecular Biology, Federal University of Rio Grande do Sul, Av. Bento Gonçalves 9500, Porto Alegre, RS 91501-970 Brazil.
Dieter EbertDepartment of Environmental Sciences, Zoology, Basel University, Vesalgasse 1, 4051 Basel, Switzerland.
Karen Luisa HaagDepartment of Genetics and Post-Graduation Program of Genetics and Molecular Biology, Federal University of Rio Grande do Sul, Av. Bento Gonçalves 9500, Porto Alegre, RS 91501-970 Brazil.ORCID 0000-0003-1162-0152
Universidade Federal do Rio Grande do Sul · BRUniversity of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The extreme genome reduction and physiological simplicity of some microsporidia has been attributed to their intracellular, obligate parasitic lifestyle. Although not all microsporidian genomes are small (size range from about 2 to 50 MB), it is suggested that the size of their genomes has been streamlined by natural selection. We explore the hypothesis that vertical transmission in microsporidia produces population bottlenecks, and thus reduces the effectiveness of natural selection. Here we compare the transposable element (TE) content of 47 microsporidian genomes, and show that genome size is positively correlated with the amount of TEs, and that species that experience vertical transmission have larger genomes with higher proportion of TEs. Our findings are consistent with earlier studies inferring that nonadaptive processes play an important role in microsporidian evolution.

Identifiers

PMID32587636
PMCPMC7313128
OpenAlexW3036856824

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.