Evidence map›Paper›PMID 32586274›Full record

ArticleBMC plant biology2020

Two Nucleoporin98 homologous genes jointly participate in the regulation of starch degradation to repress senescence in Arabidopsis.

Long Xiao, Shanshan Jiang, Penghui Huang, Fulu Chen, Xu Wang, Zhiyuan Cheng, Yuchen Miao, Liangyu Liu, Iain Searle, Chunyan Liu and 4 more

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. GermlineInternational journal of molecular sciences · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Function of Nuclear Pore Complexes in Regulation of Plant Defense Signaling.International journal of molecular sciences · 2022
    Review
  9. Article
  10. Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Long XiaoKey Laboratory of Soybean Biology, Ministry of Education/College of Agriculture, Northeast Agricultural University, Harbin, 150030, China.
Shanshan JiangMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Penghui HuangMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Fulu ChenMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Xu WangMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Zhiyuan ChengMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Yuchen MiaoKey Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, Kaifeng, 475004, China.
Liangyu LiuCollege of Life Sciences, Capital Normal University, Beijing, 100048, China.
Iain SearleSchool of Biological Sciences, School of Agriculture, Food and Wine, The University of Adelaide, Adelaide, South Australia, 5005, Australia.
Chunyan LiuKey Laboratory of Soybean Biology, Ministry of Education/College of Agriculture, Northeast Agricultural University, Harbin, 150030, China.
Xiao-Xia WuKey Laboratory of Soybean Biology, Ministry of Education/College of Agriculture, Northeast Agricultural University, Harbin, 150030, China.
Yong-Fu FuMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China. fufu19cn@163.com.ORCID http://orcid.org/0000-0002-1486-0146
Qingshan ChenKey Laboratory of Soybean Biology, Ministry of Education/College of Agriculture, Northeast Agricultural University, Harbin, 150030, China.
Xiao-Mei ZhangMOA Key Lab of Soybean Biology (Beijing), National Key Facility of Crop Gene Resource and Genetic Improvement, Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Nandajie 12, Zhongguancun, Haidian District, Beijing, 100081, China.
Chinese Academy of Agricultural Sciences · CNNortheast Agricultural University · CNCapital Normal University · CNHenan University · CNThe University of Adelaide · AU

Funding

Australian Research Council Future Fellowship FT130100525CAAS-Innovation Team Project 2019National Natural Science Foundation of China 31370324National Natural Science Foundation of China 31571411the Basal Research Fund of CAAS Y2017CG25
6 · The paper itself

Abstract

backgroundStarch is synthesized during daylight for temporary storage in leaves and then degraded during the subsequent night to support plant growth and development. Impairment of starch degradation leads to stunted growth, even senescence and death. The nuclear pore complex is involved in many cellular processes, but its relationship with starch degradation has been unclear until now. We previously identified that two Nucleoporin98 genes (Nup98a and Nup98b) redundantly regulate flowering via the CONSTANS (CO)-independent pathway in Arabidopsis thaliana. The double mutant also shows severe senescence phenotypes.

resultsWe find that Nucleoporin 98 participates in the regulation of sugar metabolism in leaves and is also involved in senescence regulation in Arabidopsis. We show that Nup98a and Nup98b function redundantly at different stages of starch degradation. The nup98a-1 nup98b-1 double mutant accumulates more starch, showing a severe early senescence phenotype compared to wild type plants. The expression of marker genes related to starch degradation is impaired in the nup98a-1 nup98b-1 double mutant, and marker genes of carbon starvation and senescence express their products earlier and in higher abundance than in wild type plants, suggesting that abnormalities in energy metabolism are the main cause of senescence in the double mutant. Addition of sucrose to the growth medium rescues early senescence phenotypes of the nup98a-1 nup98b-1 mutant.

conclusionsOur results provide evidence for a novel role of the nuclear pore complex in energy metabolism related to growth and development, in which Nup98 functions in starch degradation to control growth regulation in Arabidopsis.

Indexed as

AgingArabidopsisCarbohydrate MetabolismGenes, PlantMutationNuclear Pore Complex ProteinsStarchSugarsnuclear pore complex protein 98Nuclear Pore Complex ProteinsStarchSugarsNuclear pore complexNucleoporinNup98SenescenceStarchSugar

Identifiers

PMID32586274
PMCPMC7318766
OpenAlexW3037955426

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.