Evidence map›Paper›PMID 32585947›Full record

ArticleMicroorganisms2020

Uncovered Microbial Diversity in Antarctic Cryptoendolithic Communities Sampling three Representative Locations of the Victoria Land.

Claudia Coleine, Nuttapon Pombubpa, Laura Zucconi, Silvano Onofri, Benedetta Turchetti, Pietro Buzzini, Jason E Stajich, Laura Selbmann

Abstract read
In one paragraph

Article in Microorganisms, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Article
  2. Article
  3. Novel endolithic bacteria of phylumApplied and environmental microbiology · 2024
    Article
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  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Claudia ColeineDepartment of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.ORCID 0000-0002-9289-6179
Nuttapon PombubpaDepartment of Microbiology and Plant Pathology, University of California, Riverside, Riverside 92521, CA, USA.
Laura ZucconiDepartment of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.ORCID 0000-0001-9793-2303
Silvano OnofriDepartment of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.
Benedetta TurchettiDepartment of Agricultural, Food and Environmental Sciences, University of Perugia, 06121 Perugia, Italy.ORCID 0000-0002-7370-3028
Pietro BuzziniDepartment of Agricultural, Food and Environmental Sciences, University of Perugia, 06121 Perugia, Italy.ORCID 0000-0001-6793-0606
Jason E StajichDepartment of Microbiology and Plant Pathology, University of California, Riverside, Riverside 92521, CA, USA.ORCID 0000-0002-7591-0020
Laura SelbmannDepartment of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.

Funding

Acquisition of a Scalable Storage Cluster for Data Intensive NIH ResearchS10OD016290 · OD · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI GIRKE, THOMAS · 2014 to 2014
$593k
NIH HHS S10 OD016290
6 · The paper itself

Abstract

The endolithic niche represents an ultimate refuge to microorganisms in the Mars-like environment of the Antarctic desert. In an era of rapid global change and desertification, the interest in these border ecosystems is increasing due to speculation on how they maintain balance and functionality at the dry limits of life. To assure a reliable estimation of microbial diversity, proper sampling must be planned in order to avoid the necessity of re-sampling as reaching these remote locations is risky and requires tremendous logistical and economical efforts. In this study, we seek to determine the minimum number of samples for uncovering comprehensive bacterial and fungal diversity, comparing communities in strict vicinity to each other. We selected three different locations of the Victoria Land (Continental Antarctica) at different altitudes and showing sandstone outcrops of a diverse nature and origin-Battleship promontory (834 m above sea level (a.s.l.), Southern VL), Trio Nunatak (1,470 m a.s.l., Northern VL) and Mt New Zealand (3,100 m a.s.l., Northern VL). Overall, we found that a wider sampling would be required to capture the whole amplitude of microbial diversity, particularly in Northern VL. We concluded that the inhomogeneity of the rock matrix and the stronger environmental pressure at higher altitudes may force the communities to a higher local diversification.

Indexed as

amplicon sequencingAntarcticabacteriaendolithic communitiesfungihabitatsampling effort

Identifiers

PMID32585947
PMCPMC7356261

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.