Evidence map›Paper›PMID 32584145›Full record

ArticleThe CRISPR journal2020

Programmable RNA Targeting Using CasRx in Flies.

Anna B Buchman, Dan J Brogan, Ruichen Sun, Ting Yang, Patrick D Hsu, Omar S Akbari

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The CRISPR journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 98 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Leveraging CRISPR-Cas13d in an inducible knockdown system to interrogatebioRxiv : the preprint server for biology · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Enhanced RNA-targeting CRISPR-Cas technology in zebrafish.bioRxiv : the preprint server for biology · 2024
    Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    2024
5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Anna B BuchmanSection of Cell and Developmental Biology, University of California San Diego, La Jolla, California, USA.
Dan J BroganSection of Cell and Developmental Biology, University of California San Diego, La Jolla, California, USA.
Ruichen SunSection of Cell and Developmental Biology, University of California San Diego, La Jolla, California, USA.
Ting YangSection of Cell and Developmental Biology, University of California San Diego, La Jolla, California, USA.
Patrick D HsuLaboratory of Molecular and Cell Biology, Salk Institute for Biological Studies, La Jolla, CA 92037, USA.
Omar S AkbariSection of Cell and Developmental Biology, University of California San Diego, La Jolla, California, USA.
University of California San Diego · USSalk Institute for Biological Studies · US

Funding

Development of synthetic viral circuitry to regulate viruses in mosquito disease vectorsDP2AI152071 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI AKBARI, OMAR SULTAN · 2019 to 2019
$2.4M
NIAID NIH HHS DP2 AI152071
6 · The paper itself

Abstract

CRISPR-Cas genome editing technologies have revolutionized the fields of functional genetics and genome engineering, but with the recent discovery and optimization of RNA-targeting Cas ribonucleases, we may soon see a similar revolution in the study of RNA function and transcriptome engineering. However, to date, successful proof of principle for Cas ribonuclease RNA targeting in eukaryotic systems has been limited. Only recently has successful modification of RNA expression by a Cas ribonuclease been demonstrated in animal embryos. This previous work, however, did not evaluate endogenous expression of Cas ribonucleases and only focused on function in early developmental stages. A more comprehensive evaluation of this technology is needed to assess its potential impact. Here we report on our efforts to develop a programmable platform for RNA targeting using a Cas ribonuclease, CasRx, in the model organism

Indexed as

CRISPR-Cas SystemsAnimalsClustered Regularly Interspaced Short Palindromic RepeatsDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsGene EditingPhenotypeRibonucleasesRNARNA, Guide, CRISPR-Cas Systemscas protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsRibonucleasesRNARNA, Guide, CRISPR-Cas Systems

Identifiers

PMID32584145
PMCPMC7307691
OpenAlexW3036767147

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.