Evidence map›Paper›PMID 32583022›Full record

ArticleHuman genetics2020

Identification of novel genetic variants associated with short stature in a Baka Pygmies population.

Matteo Zoccolillo, Claudia Moia, Sergio Comincini, Davide Cittaro, Dejan Lazarevic, Karen A Pisani, Jan M Wit, Mauro Bozzola

Open access · hybridAbstract read
In one paragraph

Article in Human genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Matteo ZoccolilloSan Raffaele Telethon Institute for Gene Therapy (SR-Tiget), IRCCS San Raffaele Scientific Institute, Milan, Italy.
Claudia MoiaDepartment of Biology and Biotechnology "Lazzaro Spallanzani", Università Degli Studi Di Pavia, Pavia, Italy.
Sergio CominciniDepartment of Biology and Biotechnology "Lazzaro Spallanzani", Università Degli Studi Di Pavia, Pavia, Italy.
Davide CittaroCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Dejan LazarevicCenter for Omics Sciences, IRCCS San Raffaele Scientific Institute, Milan, Italy.
Karen A PisaniSan Raffaele Telethon Institute for Gene Therapy (SR-Tiget), IRCCS San Raffaele Scientific Institute, Milan, Italy.
Jan M WitPediatrics, Leiden University Medical Center, 2300 RC, Leiden, Netherlands.
Mauro BozzolaUniversity of Pavia, and Onlus Il Bambino E Il Suo Pediatra, Via XX Settembre 28, Galliate, 28066, Novara, Italy. mauro.bozzola@unipv.it.
University of Pavia · ITIstituti di Ricovero e Cura a Carattere Scientifico · ITIstituto di Ricovero e Cura a Carattere Scientifico San RaffaeleLeiden University Medical Center · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human growth is a complex trait determined by genetic factors in combination with external stimuli, including environment, nutrition and hormonal status. In the past, several genome-wide association studies (GWAS) have collectively identified hundreds of genetic variants having a putative effect on determining adult height in different worldwide populations. Theoretically, a valuable approach to better understand the mechanisms of complex traits as adult height is to study a population exhibiting extreme stature phenotypes, such as African Baka Pygmies. After phenotypic characterization, we sequenced the whole exomes of a cohort of Baka Pygmies and their non-Pygmies Bantu neighbors to highlight genetic variants associated with the reduced stature. Whole exome data analysis revealed 29 single nucleotide polymorphisms (SNPs) significantly associated with the reduced height in the Baka group. Among these variants, we focused on SNP rs7629425, located in the 5'-UTR of the Hyaluronidase-2 (HYAL2) gene. The frequency of the alternative allele was significantly increased compared to African and non-African populations. In vitro luciferase assay showed significant differences in transcription modulation by rs7629425 C/T alleles. In conclusion, our results suggested that the HYAL2 gene variants may play a role in the etiology of short stature in Baka Pygmies population.

Indexed as

AdultAllelesBlack PeopleBody HeightCell Adhesion MoleculesExomeFemaleGenome-Wide Association StudyGPI-Linked ProteinsGrowth DisordersHumansHyaluronoglucosaminidaseMalePolymorphism, Single NucleotideCell Adhesion MoleculesGPI-Linked ProteinsHyaluronoglucosaminidase

Identifiers

PMID32583022
PMCPMC7519921
OpenAlexW3037959308

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.