Evidence map›Paper›PMID 32582265›Full record

ArticleFrontiers in plant science2020

Genome-Wide Association Studies in Diverse Spring Wheat Panel for Stripe, Stem, and Leaf Rust Resistance.

Deepender Kumar, Animesh Kumar, Vinod Chhokar, Om Prakash Gangwar, Subhash Chander Bhardwaj, M Sivasamy, S V Sai Prasad, T L Prakasha, Hanif Khan, Rajender Singh and 10 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
15.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 106 citations in OpenAlex.

  1. Meta-QTLs for multiple disease resistance involving three rusts in common wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Pooled it
  2. Unlocking the potential of spring wheat genetic resources: uncovering resistance sources against leaf rust and yellow rust.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
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  12. Genome-wide association mapping for the identification of stripe rust resistance loci in US hard winter wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 4 institutions in 1 country.

Deepender KumarDepartment of Bio and Nanotechnology, Guru Jambheshwar University of Science and Technology, Hisar, India.
Animesh KumarICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Vinod ChhokarDepartment of Bio and Nanotechnology, Guru Jambheshwar University of Science and Technology, Hisar, India.
Om Prakash GangwarICAR-Indian Institute of Wheat and Barley Research, Regional Station, Shimla, India.
Subhash Chander BhardwajICAR-Indian Institute of Wheat and Barley Research, Regional Station, Shimla, India.
M SivasamyICAR-Indian Agricultural Research Institute, Regional Station, Wellington, India.
S V Sai PrasadICAR-Indian Agricultural Research Institute, Regional Station, Indore, India.
T L PrakashaICAR-Indian Agricultural Research Institute, Regional Station, Indore, India.
Hanif KhanICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Rajender SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Pradeep SharmaICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Sonia SheoranICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Mir Asif IquebalICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Sarika JaiswalICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Ulavappa B AngadiICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Gyanendra SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Anil RaiICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Gyanendra Pratap SinghICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Dinesh KumarICAR-Indian Agricultural Statistics Research Institute, New Delhi, India.
Ratan TiwariICAR-Indian Institute of Wheat and Barley Research, Karnal, India.
Indian Institute of Wheat and Barley Research · INIndian Agricultural Statistics Research Institute · INIndian Agricultural Research Institute · INGuru Jambheshwar University of Science and Technology · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among several important wheat foliar diseases, Stripe rust (YR), Leaf rust (LR), and Stem rust (SR) have always been an issue of concern to the farmers and wheat breeders. Evolution of virulent pathotypes of these rusts has posed frequent threats to an epidemic. Pyramiding rust-resistant genes are the most economical and environment-friendly approach in postponing this inevitable threat. To achieve durable long term resistance against the three rusts, an attempt in this study was made searching for novel sources of resistant alleles in a panel of 483 spring wheat genotypes. This is a unique and comprehensive study where evaluation of a diverse panel comprising wheat germplasm from various categories and adapted to different wheat agro-climatic zones was challenged with 18 pathotypes of the three rusts with simultaneous screening in field conditions. The panel was genotyped using 35K SNP array and evaluated for each rust at two locations for two consecutive crop seasons. High heritability estimates of disease response were observed between environments for each rust type. A significant effect of population structure in the panel was visible in the disease response. Using a compressed mixed linear model approach, 25 genomic regions were found associated with resistance for at least two rusts. Out of these, seven were associated with all the three rusts on chromosome groups 1 and 6 along with 2B. For resistance against YR, LR, and SR, there were 16, 18, and 27 QTL (quantitative trait loci) identified respectively, associated at least in two out of four environments. Several of these regions got annotated with resistance associated genes

Indexed as

35K SNP arrayGWASleaf rustresistancestem ruststripe rustwheat

Identifiers

PMID32582265
PMCPMC7286347
OpenAlexW3033552629

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.