Evidence map›Paper›PMID 32582262›Full record

ArticleFrontiers in plant science2020

Image Phenotyping of Spring Barley (

Krzysztof Mikołajczak, Piotr Ogrodowicz, Hanna Ćwiek-Kupczyńska, Kathleen Weigelt-Fischer, Srinivasa Reddy Mothukuri, Astrid Junker, Thomas Altmann, Karolina Krystkowiak, Tadeusz Adamski, Maria Surma and 2 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. High-Throughput Phenotyping Methods for Breeding Drought-Tolerant Crops.International journal of molecular sciences · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Krzysztof MikołajczakInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Piotr OgrodowiczInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Hanna Ćwiek-KupczyńskaInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Kathleen Weigelt-FischerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Srinivasa Reddy MothukuriLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Astrid JunkerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Thomas AltmannLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Gatersleben, Germany.
Karolina KrystkowiakInstitute of Bioorganic Chemistry, Polish Academy of Sciences, Poznań, Poland.
Tadeusz AdamskiInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Maria SurmaInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Anetta KuczyńskaInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.
Paweł KrajewskiInstitute of Plant Genetics, Polish Academy of Sciences, Poznań, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Image-based phenotyping is a non-invasive method that permits the dynamic evaluation of plant features during growth, which is especially important for understanding plant adaptation and temporal dynamics of responses to environmental cues such as water deficit or drought. The aim of the present study was to use high-throughput imaging in order to assess the variation and dynamics of growth and development during drought in a spring barley population and to investigate associations between traits measured in time and yield-related traits measured after harvesting. Plant material covered recombinant inbred line population derived from a cross between European and Syrian cultivars. After placing the plants on the platform (28th day after sowing), drought stress was applied for 2 weeks. Top and side cameras were used to capture images daily that covered the visible range of the light spectrum, fluorescence signals, and the near infrared spectrum. The image processing provided 376 traits that were subjected to analysis. After 32 days of image phenotyping, the plants were cultivated in the greenhouse under optimal watering conditions until ripening, when several architecture and yield-related traits were measured. The applied data analysis approach, based on the clustering of image-derived traits into groups according to time profiles of statistical and genetic parameters, permitted to select traits representative for inference from the experiment. In particular, drought effects for 27 traits related to convex hull geometry, texture, proportion of brown pixels and chlorophyll intensity were found to be highly correlated with drought effects for spike traits and thousand grain weight.

Indexed as

automated high-throughput plant phenotypingbarleydata analysis methodsdrought stressdynamic traits

Identifiers

PMID32582262
PMCPMC7296146

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.