Evidence map›Paper›PMID 32581102›Full record

ArticleJournal of virology2020

Epstein-Barr Virus Genomes Reveal Population Structure and Type 1 Association with Endemic Burkitt Lymphoma.

Yasin Kaymaz, Cliff I Oduor, Ozkan Aydemir, Micah A Luftig, Juliana A Otieno, John Michael Ong'echa, Jeffrey A Bailey, Ann M Moormann

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Journal of virology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. EBV Genome Variations and Association With Diseases.Journal of medical virology · 2026
    Review
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Human herpesvirus diversity is altered in HLA class I binding peptides.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Yasin KaymazProgram in Bioinformatics and Integrative Biology, University of Massachusetts Medical School, Worcester, Massachusetts, USA.ORCID 0000-0002-9725-7536
Cliff I OduorCenter for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya.
Ozkan AydemirDepartment of Pathology and Laboratory Medicine, Warren Alpert Medical School, Brown University, Providence, Rhode Island, USA.
Micah A LuftigDepartment of Molecular Genetics and Microbiology, Duke University School of Medicine, Durham, North Carolina, USA.ORCID 0000-0002-2964-1907
Juliana A OtienoJaramogi Oginga Odinga Teaching and Referral Hospital, Ministry of Health, Kisumu, Kenya.
John Michael Ong'echaCenter for Global Health Research, Kenya Medical Research Institute, Kisumu, Kenya.
Jeffrey A Bailey *Department of Pathology and Laboratory Medicine, Warren Alpert Medical School, Brown University, Providence, Rhode Island, USA jeffrey_bailey@brown.edu ann.moormann@umassmed.edu.
Ann M Moormann *Division of Infectious Diseases and Immunology, Department of Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USA jeffrey_bailey@brown.edu ann.moormann@umassmed.edu.ORCID 0000-0003-1113-2829
Brown University · USUniversity of Massachusetts Chan Medical School · USDuke University · USKenya Medical Research Institute · KEMinistry of Health · KE

Funding

University of Massachusetts Center for Clinical and Translational ScienceUL1TR000161 · NCATS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI LUZURIAGA, KATHERINE F · 2012 to 2015
$11.0M
Impact of malaria on shaping immunity to EBV in the etiology of Burkitt lymphomaR01CA189806 · NCI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MOORMANN, ANN M · 2014 to 2024
$5.7M
Dissecting the role of EBV and P. falciparum in endemic Burkitt lymphoma pathogenesisR01CA234348 · NCI · DUKE UNIVERSITY · PI LUFTIG, MICAH A. · 2019 to 2023
$3.3M
T Cell Immunity in Endemic Burkitt LymphomaR01CA134051 · NCI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI MOORMANN, ANN M · 2008 to 2012
$2.3M
NCATS NIH HHS UL1 TR000161NCI NIH HHS R01 CA134051NCI NIH HHS R01 CA189806NCI NIH HHS R01 CA234348
6 · The paper itself

Abstract

Endemic Burkitt lymphoma (eBL), the most prevalent pediatric cancer in sub-Saharan Africa, is distinguished by its inclusion of Epstein-Barr virus (EBV). In order to better understand the impact of EBV variation in eBL tumorigenesis, we improved viral DNA enrichment methods and generated a total of 98 new EBV genomes from both eBL cases (

Indexed as

Genome, ViralAdolescentBurkitt LymphomaChildChild, PreschoolDNA, ViralEpstein-Barr Virus InfectionsEpstein-Barr Virus Nuclear AntigensFemaleGenetic VariationGenome-Wide Association StudyHerpesvirus 4, HumanHumansInfantKenyaMaleBARF1 protein, Human herpesvirus 4DNA, ViralEBV-encoded nuclear antigen 1Epstein-Barr Virus Nuclear AntigensReceptor, Macrophage Colony-Stimulating FactorViral ProteinsEBV type 1EBV type 2endemic Burkitt lymphomaEpstein-Barr virusgenetic variationgenome sequencing

Identifiers

PMID32581102
PMCPMC7431785
OpenAlexW3036759441

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.