Evidence map›Paper›PMID 32580935›Full record

ArticleDevelopment (Cambridge, England)2020

A single cell transcriptional atlas of early synovial joint development.

Qin Bian, Yu-Hao Cheng, Jordan P Wilson, Emily Y Su, Dong Won Kim, Hong Wang, Sooyeon Yoo, Seth Blackshaw, Patrick Cahan

Open access · greenAbstract read
In one paragraph

Article in Development (Cambridge, England), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 42 citations in OpenAlex.

  1. Identification and characterization of POSTNJournal of orthopaedic translation · 2026
    Article
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  3. Clec3bBone research · 2026
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  16. Cell cycle expression heterogeneity predicts degree of differentiation.bioRxiv : the preprint server for biology · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Qin BianInstitute for Cell Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.ORCID 0000-0003-4190-0913
Yu-Hao ChengInstitute for Cell Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.ORCID 0000-0002-7472-8518
Jordan P WilsonInstitute for Cell Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.
Emily Y SuDepartment of Biomedical Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.
Dong Won KimSolomon H. Snyder Department of Neuroscience, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.
Hong WangSolomon H. Snyder Department of Neuroscience, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.
Sooyeon YooSolomon H. Snyder Department of Neuroscience, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.ORCID 0000-0003-4718-900X
Seth BlackshawInstitute for Cell Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA.
Patrick CahanInstitute for Cell Engineering, Johns Hopkins School of Medicine, Baltimore MD 21205, USA patrick.cahan@jhmi.edu.ORCID 0000-0003-3652-2540
Johns Hopkins University · US

Funding

BIOMEDICAL ENGINEERING TRAINING PROGRAMT32GM007057 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI KANOLD, PATRICK O, KARCHIN, RACHEL · 1985 to 2023
$10.4M
From intra to intercellular regulatory networks that define cell type identityR35GM124725 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI Patrick Cahan · 2017 to 2026
$4.5M
HopkinsPREP: Research, Community, Professional Training and Personal GrowthR25GM109441 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI WILSON, KATHERINE L · 2015 to 2024
$3.2M
NIGMS NIH HHS R25 GM109441NIGMS NIH HHS R35 GM124725NIGMS NIH HHS T32 GM007057
6 · The paper itself

Abstract

Synovial joint development begins with the formation of the interzone, a region of condensed mesenchymal cells at the site of the prospective joint. Recently, lineage-tracing strategies have revealed that Gdf5-lineage cells native to and from outside the interzone contribute to most, if not all, of the major joint components. However, there is limited knowledge of the specific transcriptional and signaling programs that regulate interzone formation and fate diversification of synovial joint constituents. To address this, we have performed single cell RNA-Seq analysis of 7329 synovial joint progenitor cells from the developing murine knee joint from E12.5 to E15.5. By using a combination of computational analytics,

Indexed as

AnimalsCell DifferentiationCell LineageChondrocytesCollagen Type IIEmbryo, MammalianEmbryonic DevelopmentGrowth Differentiation Factor 5In Situ HybridizationMesenchymal Stem CellsMiceMice, Inbred C57BLMice, KnockoutSequence Analysis, RNASingle-Cell AnalysisSOX9 Transcription FactorCol2a1 protein, mouseCollagen Type IIGdf5 protein, mouseGrowth Differentiation Factor 5Sox9 protein, mouseSOX9 Transcription FactorArticular cartilageChondrocyteGdf5InterzoneLigamentMeniscusSingle cell RNA-SeqSynovial joint developmentSynovium

Identifiers

PMID32580935
PMCPMC7390639
OpenAlexW3037288150

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.