Evidence map›Paper›PMID 32580526›Full record

ArticleGenes2020

Array-Based Epigenetic Aging Indices May Be Racially Biased.

Robert Philibert, Steven R H Beach, Man-Kit Lei, Frederick X Gibbons, Meg Gerrard, Ronald L Simons, Meeshanthini V Dogan

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 35 citations in OpenAlex.

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  18. A biosocial return to race? A cautionary view for the postgenomic era.American journal of human biology : the official journal of the Human Biology Council · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Robert PhilibertDepartment of Psychiatry, University of Iowa, Iowa City, IA 52242, USA.
Steven R H BeachCenter for Family Research, University of Georgia, Athens, GA 30602, USA.
Man-Kit LeiCenter for Family Research, University of Georgia, Athens, GA 30602, USA.
Frederick X GibbonsUniversity of Connecticut, Storrs, CT 06268, USA.
Meg GerrardUniversity of Connecticut, Storrs, CT 06268, USA.
Ronald L SimonsCenter for Family Research, University of Georgia, Athens, GA 30602, USA.ORCID 0000-0002-7757-6548
Meeshanthini V DoganDepartment of Psychiatry, University of Iowa, Iowa City, IA 52242, USA.
University of Georgia · USUniversity of Connecticut · USUniversity of Iowa · US

Funding

Health Behaviors among Young Black Adults: Risk and ResilienceR01DA021898 · NIDA · UNIVERSITY OF CONNECTICUT STORRS · PI GIBBONS, FREDERICK X · 2008 to 2018
$8.6M
Contextual and Health Behavior Effects on Epigenetic Aging Among African AmericansR01CA220254 · NCI · UNIVERSITY OF CONNECTICUT STORRS · PI BEACH, STEVEN R, GIBBONS, FREDERICK X · 2018 to 2022
$3.5M
NCI NIH HHS R01 CA220254NIDA NIH HHS R01 DA021898NIH HHS AG055393NIH HHS CA0220254
6 · The paper itself

Abstract

Epigenetic aging (EA) indices are frequently used as predictors of mortality and other important health outcomes. However, each of the commonly used array-based indices has significant heritable components which could tag ethnicity and potentially confound comparisons across racial and ethnic groups. To determine if this was possible, we examined the relationship of DNA methylation in cord blood from 203 newborns (112 African American (AA) and 91 White) at the 513 probes from the Levine PhenoAge Epigenetic Aging index to ethnicity. Then, we examined all sites significantly associated with race in the newborn sample to determine if they were also associated with an index of ethnic genetic heritage in a cohort of 505 AA adults. After Bonferroni correction, methylation at 50 CpG sites was significantly associated with ethnicity in the newborn cohort. The five most significant sites predicted ancestry with a receiver operator characteristic area under the curve of 0.97. Examination of the top 50 sites in the AA adult cohort showed that methylation status at 11 of those sites was also associated with percentage European ancestry. We conclude that the Levine PhenoAge Index is influenced by cryptic ethnic-specific genetic influences. This influence may extend to similarly constructed EA indices and bias cross-race comparisons.

Indexed as

AgingBlack or African AmericanDNA MethylationEpigenesis, GeneticEthnicityFemaleFetal BloodHispanic or LatinoHumansInfant, NewbornMaleWhite PeopleDNA methylationepigenetic agingepigeneticshealthcare disparities

Identifiers

PMID32580526
PMCPMC7349894
OpenAlexW3036477530

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.