Evidence map›Paper›PMID 32579336›Full record

ArticleACS chemical neuroscience2020

Distinguishing Potassium Channel Resting State Conformations in Live Cells with Environment-Sensitive Fluorescence.

Sebastian Fletcher-Taylor, Parashar Thapa, Rebecka J Sepela, Rayan Kaakati, Vladimir Yarov-Yarovoy, Jon T Sack, Bruce E Cohen

Open access · greenAbstract read
In one paragraph

Article in ACS chemical neuroscience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Precise and Stable Labeling of Quantum Dots with Engineered Antibodies.Methods in molecular biology (Clifton, N.J.) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sebastian Fletcher-Taylor
Parashar Thapa
Rebecka J Sepela
Rayan Kaakati
Vladimir Yarov-Yarovoy
University of California, Davis · USLawrence Berkeley National Laboratory · US

Funding

UC Davis MCB T32 Administrative Supplement to Recognize Excellence in Diversity, Equity, Inclusion, and Accessibility (DEIA) MentorshipT32GM007377 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEDIN, FREDERIC LOUIS · 1985 to 2023
$9.9M
Visualizing endogenous ion channel activationR01NS096317 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COHEN, BRUCE E, SACK, JON THOMAS · 2016 to 2019
$1.4M
Neuronal voltage tracers for photoacoustic imaging in the deep brainR21EY026449 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SACK, JON THOMAS · 2015 to 2016
$459k
Endogenous Ion Channel Activity Tracers to Monitor the Involvement of Kv2 Channels During Ischemic AttackF31NS108614 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SEPELA, REBECKA JANE · 2019 to 2021
$105k
NEI NIH HHS R21 EY026449NIGMS NIH HHS T32 GM007377NINDS NIH HHS F31 NS108614NINDS NIH HHS R01 NS096317
6 · The paper itself

Abstract

Ion channels are polymorphic membrane proteins whose high-resolution structures offer images of individual conformations, giving us starting points for identifying the complex and transient allosteric changes that give rise to channel physiology. Here, we report live-cell imaging of voltage-dependent structural changes of voltage-gated Kv2.1 channels using peptidyl tarantula toxins labeled with an environment-sensitive fluorophore, whose spectral shifts enable identification of voltage-dependent conformation changes in the resting voltage sensing domain (VSD) of the channel. We synthesize a new environment-sensitive, far-red fluorophore, julolidine phenoxazone (JP) azide, and conjugate it to tarantula toxin GxTX to characterize Kv2.1 VSD allostery during membrane depolarization. JP has an inherent response to the polarity of its immediate surroundings, offering site-specific structural insight into each channel conformation. Using voltage-clamp spectroscopy to collect emission spectra as a function of membrane potential, we find that they vary with toxin labeling site, the presence of Kv2 channels, and changes in membrane potential. With a high-affinity conjugate in which the fluorophore itself interacts closely with the channel, the emission shift midpoint is 50 mV more negative than the Kv2.1 gating current midpoint. This suggests that substantial conformational changes at the toxin-channel interface are associated with early gating charge transitions and these are not concerted with VSD motions at more depolarized potentials. These fluorescent probes enable study of conformational changes that can be correlated with electrophysiology, putting channel structures and models into a context of live-cell membranes and physiological states.

Indexed as

Potassium ChannelsSpider VenomsFluorescenceIon Channel GatingMembrane PotentialsPotassium ChannelsSpider VenomsallosteryfluorophorePotassium channelspectroscopystructuretoxin

Identifiers

PMID32579336
PMCPMC7894042
OpenAlexW3037463930

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.