Evidence map›Paper›PMID 32579254›Full record

ArticleJournal of medical virology2021

SARS-CoV-2 and SARS-CoV: Virtual screening of potential inhibitors targeting RNA-dependent RNA polymerase activity (NSP12).

Zijing Ruan, Chao Liu, Yuting Guo, Zhenqing He, Xinhe Huang, Xu Jia, Tai Yang

Open access · bronzeAbstract read
In one paragraph

Article in Journal of medical virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed
3.2field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 134 citations in OpenAlex.

  1. Trial
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  7. Pharmacological Activity of Cepharanthine.Molecules (Basel, Switzerland) · 2023
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  12. Effect of farnesyltransferase inhibitors on SARS-CoV-2.Journal of global antimicrobial resistance · 2023
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18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Zijing RuanNon-coding RNA and Drug Discovery Key Laboratory of Sichuan Province, Science and Technology Department, Chengdu Medical College, Chengdu, Sichuan, China.
Chao LiuNon-coding RNA and Drug Discovery Key Laboratory of Sichuan Province, Science and Technology Department, Chengdu Medical College, Chengdu, Sichuan, China.
Yuting GuoNon-coding RNA and Drug Discovery Key Laboratory of Sichuan Province, Science and Technology Department, Chengdu Medical College, Chengdu, Sichuan, China.
Zhenqing HeNon-coding RNA and Drug Discovery Key Laboratory of Sichuan Province, Science and Technology Department, Chengdu Medical College, Chengdu, Sichuan, China.
Xinhe HuangSchool of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan, China.
Xu JiaNon-coding RNA and Drug Discovery Key Laboratory of Sichuan Province, Science and Technology Department, Chengdu Medical College, Chengdu, Sichuan, China.ORCID 0000-0002-1612-1136
Tai YangSchool of Pharmacy, Chengdu Medical College, Chengdu, Sichuan, China.
Chengdu Medical College · CNSouthwest Jiaotong University · CN

Funding

The "1000 Talent Plan" of Sichuan Province 1060The "1000 Talent Plan" of Sichuan Province 980The National Natural Science Foundation of China 31600116The National Natural Science Foundation of China 31870135
6 · The paper itself

Abstract

Since the outbreak of severe acute respiratory syndrome (SARS) in 2003, the harm caused by coronaviruses to the world cannot be underestimated. Recently, a novel coronavirus (severe acute respiratory syndrome coronavirus-2 [SARS-CoV-2]) initially found to trigger human severe respiratory illness in Wuhan City of China in 2019, has infected more than six million people worldwide by 21 June 2020, and which has been recognized as a public health emergency of international concern as well. And the virus has spread to more than 200 countries around the world. However, the effective drug has not yet been officially licensed or approved to treat SARS-Cov-2 and SARS-Cov infection. NSP12-NSP7-NSP8 complex of SARS-CoV-2 or SARS-CoV, essential for viral replication and transcription, is generally regarded as a potential target to fight against the virus. According to the NSP12-NSP7-NSP8 complex (PDB ID: 7BW4) structure of SARS-CoV-2 and the NSP12-NSP7-NSP8 complex (PDB ID: 6NUR) structure of SARS-CoV, NSP12-NSP7 interface model, and NSP12-NSP8 interface model were established for virtual screening in the present study. Eight compounds (Nilotinib, Saquinavir, Tipranavir, Lonafarnib, Tegobuvir, Olysio, Filibuvir, and Cepharanthine) were selected for binding free energy calculations based on virtual screening and docking scores. All eight compounds can combine well with NSP12-NSP7-NSP8 in the crystal structure, providing drug candidates for the treatment and prevention of coronavirus disease 2019 and SARS.

Indexed as

Molecular Docking SimulationAntiviral AgentsCoronavirus RNA-Dependent RNA PolymeraseDrug DiscoveryModels, MolecularSARS-CoV-2Severe acute respiratory syndrome-related coronavirusSmall Molecule LibrariesAntiviral AgentsCoronavirus RNA-Dependent RNA PolymeraseNSP12 protein, SARS-CoV-2Small Molecule Librariesantiviral drugsCOVID-19drug candidatesNSP12-NSP7-NSP8SARS-CoVSARS-CoV-2

Identifiers

PMID32579254
PMCPMC7361265
OpenAlexW3036699232

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.