Evidence map›Paper›PMID 32577428›Full record

ArticleOpen forum infectious diseases2020

Early-Morning vs Spot Posterior Oropharyngeal Saliva for Diagnosis of SARS-CoV-2 Infection: Implication of Timing of Specimen Collection for Community-Wide Screening.

Derek Ling-Lung Hung, Xin Li, Kelvin Hei-Yeung Chiu, Cyril Chik-Yan Yip, Kelvin Kai-Wang To, Jasper Fuk-Woo Chan, Siddharth Sridhar, Tom Wai-Hin Chung, Kwok-Cheung Lung, Raymond Wai-To Liu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Open forum infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed, 2 pooled it
1.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 2 syntheses or guidelines pooled it, 40 citations in OpenAlex.

  1. Saliva sample for the massive screening of SARS-CoV-2 infection: a systematic review.Oral surgery, oral medicine, oral pathology and oral radiology · 2021
    Pooled it
  2. Pooled it
  3. Article
  4. Review
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  7. Comparing SARS-CoV-2 Viral Load in Human Saliva to Oropharyngeal Swabs, Nasopharyngeal Swabs, and Sputum: A Systematic Review and Meta-Analysis.The Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2023
    Review
  8. Article
  9. Review
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  11. Article
  12. Does the timing of saliva collection affect the diagnosis of SARS-CoV-2 infection?Journal of infection and chemotherapy : official journal of the Japan Society of Chemotherapy · 2022
    Article
  13. Review
  14. Article
  15. Review
  16. The Use of Saliva as a Biosample in the Light of COVID-19.Diagnostics (Basel, Switzerland) · 2021
    Review
  17. Article
  18. Avoiding COVID-19 hospital outbreaks: RT-PCR swab and clinical assessment.International journal of clinical practice · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Derek Ling-Lung HungDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Xin LiDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Kelvin Hei-Yeung ChiuDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Cyril Chik-Yan YipDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Kelvin Kai-Wang ToState Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region, China.
Jasper Fuk-Woo ChanState Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region, China.
Siddharth SridharState Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region, China.
Tom Wai-Hin ChungDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Kwok-Cheung LungDepartment of Medicine, Pamela Youde Nethersole Eastern Hospital, Hong Kong Special Administrative Region, China.
Raymond Wai-To LiuDepartment of Medicine & Geriatrics, Ruttonjee Hospital, Hong Kong Special Administrative Region, China.
Grace Sze-Wai KwanDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Ivan Fan-Ngai HungDepartment of Medicine, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region, China.
Vincent Chi-Chung ChengDepartment of Microbiology, Queen Mary Hospital, Hong Kong Special Administrative Region, China.
Kwok-Yung YuenState Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Pokfulam, Hong Kong Special Administrative Region, China.
Queen Mary Hospital · CNUniversity of Hong Kong · HKUniversity of Hong Kong - Shenzhen Hospital · CNPamela Youde Nethersole Eastern Hospital · CNRuttonjee Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPosterior oropharyngeal saliva is increasingly recognized as a valid respiratory specimen for SARS-CoV-2 diagnosis. It is easy to collect and suitable for community-wide screening. The optimal timing of collection is currently unknown, and we speculate that an early-morning specimen before oral hygiene and breakfast would increase the diagnostic yield.

methodsPosterior oropharyngeal saliva was collected at 5 different time points within the same day from 18 patients with previously confirmed SARS-CoV-2 infection by molecular testing. Cycle threshold (Ct) values were compared.

resultsThere was an overall trend of lower Ct values from specimens collected in the early morning, with a gradual decrease of viral load towards nighttime, but reaching statistical significance only when compared with the specimens collected at bedtime. Eight out of 13 subjects had a higher viral load in the early morning than the rest of the 4 time points (before lunch, before teatime at 3 pm, before dinner, before bedtime).

conclusionsThe result suggests a diurnal variation of viral shedding from the upper respiratory tract with a trend showing higher viral load in the early morning. For community screening purposes, posterior oropharyngeal saliva could be taken throughout the day, but preferably in the early morning to maximize the yield.

Indexed as

coronavirusdiagnosissalivaSARS-CoV-2screening

Identifiers

PMID32577428
PMCPMC7299521
OpenAlexW3034159438

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.