Evidence map›Paper›PMID 32577166›Full record

ArticleOncotarget2020

Profiling the circulating mRNA transcriptome in human liver disease.

Aejaz Sayeed, Brielle E Dalvano, David E Kaplan, Usha Viswanathan, John Kulp, Alhaji H Janneh, Lu-Yu Hwang, Adam Ertel, Cataldo Doria, Timothy Block

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 1 country.

Aejaz SayeedBaruch S. Blumberg Institute, Doylestown, PA, USA.
Brielle E DalvanoBaruch S. Blumberg Institute, Doylestown, PA, USA.
David E KaplanUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.
Usha ViswanathanBaruch S. Blumberg Institute, Doylestown, PA, USA.
John KulpBaruch S. Blumberg Institute, Doylestown, PA, USA.
Alhaji H JannehBaruch S. Blumberg Institute, Doylestown, PA, USA.
Lu-Yu HwangDepartment of Epidemiology, Human Genetics and Environment Science Center for Infectious Diseases School of Public Health, the University of Texas HSC, Houston, TX, USA.
Adam ErtelDepartment of Cancer Biology, Sidney Kimmel Cancer Center, Cancer Genomics Core Facility, Thomas Jefferson University, Philadelphia, PA, USA.
Cataldo DoriaCapital Health Cancer Center, One Capital Way, Pennington, NJ, USA.
Timothy BlockBaruch S. Blumberg Institute, Doylestown, PA, USA.
Baruch S. Blumberg Institute · USCapital Health · USMedical University of South Carolina · USSidney Kimmel Cancer Center · USThe University of Texas Health Science Center at Houston · USUniversity of Pennsylvania · US

Funding

Tumor antigen-specific T-cells and hepatocellular carcinomaR01CA166111 · NCI · UNIVERSITY OF PENNSYLVANIA · PI KAPLAN, DAVID E · 2013 to 2016
$1.3M
NCI NIH HHS R01 CA166111
6 · The paper itself

Abstract

The human circulation contains cell-free DNA and non-coding microRNA (miRNA). Less is known about the presence of messenger RNA (mRNA). This report profiles the human circulating mRNA transcriptome in people with liver cirrhosis (LC) and hepatocellular carcinoma (HCC) to determine whether mRNA analytes can be used as biomarkers of liver disease. Using RNAseq and RT-qPCR, we investigate circulating mRNA in plasma from HCC and LC patients and demonstrate detection of transcripts representing more than 19,000 different protein coding genes. Remarkably, the circulating mRNA expression levels were similar from person to person over the 21 individuals whose samples were analyzed by RNAseq. Liver derived circulating transcripts such as albumin (

Indexed as

biomarkerscirculating transcriptsextracellular vesicleshepatocellular carcinomaliver cirrhosis

Identifiers

PMID32577166
PMCPMC7289528
OpenAlexW3035675563

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.