Evidence map›Paper›PMID 32576967›Full record

ArticleScientific reports2020

The association of inflammasome and TLR2 gene polymorphisms with susceptibility to tuberculosis in the Han Taiwanese population.

Chi-Wei Liu, Chou-Jui Lin, Hui-Chun Hu, Hsiu-Jung Liu, Yu-Chi Chiu, Shih-Wei Lee, Lawrence Shih-Hsin Wu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Journal of clinical tuberculosis and other mycobacterial diseases · 2024
    Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Chi-Wei Liu *Taoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan.
Chou-Jui Lin *Taoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan.
Hui-Chun HuTaoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan.
Hsiu-Jung LiuTaoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan.
Yu-Chi ChiuTaoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan.
Shih-Wei LeeTaoyuan General Hospital, Ministry of Health and Welfare, Taoyuan, Taiwan. chestman9@gmail.com.
Lawrence Shih-Hsin WuGraduate Institute of Biomedical Sciences, China Medical University, Taichung, Taiwan. lshwu@hotmail.com.
Ministry of Health and Welfare · TWChina Medical University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pulmonary tuberculosis (TB) caused by Mycobacterium tuberculosis (Mtb) is a global public health concern. Although inflammasome and the toll-like receptor 2 (TLR2) genes play an important role in host defense against Mtb, the associations of polymorphisms in these genes with TB risk are incompletely understood. A total of 230 TB patients and 213 individuals without TB were enrolled in this study. A significant difference in the frequencies of different AIM2 rs2276405 genotypes between the non-TB and TB groups was detected. When the patients were stratified by gender or age, significant differences in genotype frequencies at NLRP3 rs34298354 in men and in non-aged (≤65-year-old) subjects and at IFI16 rs1772408 in women were found. OR analysis showed that the TC rs34298354 genotype in NLRP3 was associated with reduced risk of TB. In women, the AG rs1772408 genotype in IFI16 was associated with decreased TB risk. Haplotype analysis showed that, in comparison with the most common haplotype (T-T) of rs3804099-rs3804100 in the TLR2 gene, the C-T haplotype was associated with an increased risk for TB. Our study indicates that rs34298354 in NLRP3 and rs1772408 in IFI16 protect individuals from TB, and that the less common TLR2 haplotype is associated with increased TB susceptibility.

Indexed as

AdultAgedAged, 80 and overAsian PeopleCase-Control StudiesFemaleGene FrequencyGenetic Predisposition to DiseaseGenotypeHaplotypesHumansInflammasomesMaleMiddle AgedMycobacterium tuberculosisPolymorphism, Single NucleotideInflammasomesTLR2 protein, humanToll-Like Receptor 2

Identifiers

PMID32576967
PMCPMC7311452
OpenAlexW3036922634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.