Evidence map›Paper›PMID 32576843›Full record

ArticleScientific reports2020

Quantifying Perfusion Properties with DCE-MRI Using a Dictionary Matching Approach.

Satyam Ghodasara, Yong Chen, Shivani Pahwa, Mark A Griswold, Nicole Seiberlich, Katherine L Wright, Vikas Gulani

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Satyam GhodasaraSchool of Medicine, Case Western Reserve University, Cleveland, Ohio, USA.ORCID http://orcid.org/0000-0002-5332-3132
Yong ChenDepartment of Radiology, University of North Carolina, Chapel Hill, North Carolina, USA.
Shivani PahwaSchool of Medicine, Case Western Reserve University, Cleveland, Ohio, USA.ORCID http://orcid.org/0000-0002-3219-874X
Mark A GriswoldSchool of Medicine, Case Western Reserve University, Cleveland, Ohio, USA.
Nicole SeiberlichDepartment of Radiology, University of Michigan, Ann Arbor, Michigan, USA.
Katherine L WrightDepartment of Radiology, University of Michigan, Ann Arbor, Michigan, USA.
Vikas GulaniDepartment of Radiology, University of Michigan, Ann Arbor, Michigan, USA. vikas@med.umich.edu.ORCID http://orcid.org/0000-0003-0889-5999

Funding

Clinical and Translational Science Collaborative of ClevelandKL2TR000440 · NCATS · CASE WESTERN RESERVE UNIVERSITY · PI KONSTAN, MICHAEL W. · 2012 to 2016
$11.1M
Comprehensive quantitative ultrafast 3D liver MRIR01DK098503 · NIDDK · CASE WESTERN RESERVE UNIVERSITY · PI GULANI, VIKAS, SEIBERLICH, NICOLE · 2013 to 2017
$2.6M
Optimization of MR Fingerprinting (MRF) for Quantitative MRIR01EB016728 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI GRISWOLD, MARK, GULANI, VIKAS · 2014 to 2017
$2.0M
NCATS NIH HHS KL2 TR000440NIBIB NIH HHS R01 EB016728NIDDK NIH HHS R01 DK098503
6 · The paper itself

Abstract

Perfusion properties can be estimated from pharmacokinetic models applied to DCE-MRI data using curve fitting algorithms; however, these suffer from drawbacks including the local minimum problem and substantial computational time. Here, a dictionary matching approach is proposed as an alternative. Curve fitting and dictionary matching were applied to simulated data using the dual-input single-compartment model with known perfusion property values and 5 in vivo DCE-MRI datasets. In simulation at SNR 60 dB, the dictionary estimate had a mean percent error of 0.4-1.0% for arterial fraction, 0.5-1.4% for distribution volume, and 0.0% for mean transit time. The curve fitting estimate had a mean percent error of 1.1-2.1% for arterial fraction, 0.5-1.3% for distribution volume, and 0.2-1.8% for mean transit time. In vivo, dictionary matching and curve fitting showed no statistically significant differences in any of the perfusion property measurements in any of the 10 ROIs between the methods. In vivo, the dictionary method performed over 140-fold faster than curve fitting, obtaining whole volume perfusion maps in just over 10 s. This study establishes the feasibility of using a dictionary matching approach as a new and faster way of estimating perfusion properties from pharmacokinetic models in DCE-MRI.

Indexed as

AlgorithmsContrast MediaComputer SimulationHumansImage Processing, Computer-AssistedLiverLiver CirrhosisLiver NeoplasmsMagnetic Resonance ImagingModels, BiologicalMonte Carlo MethodPerfusionContrast Media

Identifiers

PMID32576843
PMCPMC7311534

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.