Evidence map›Paper›PMID 32574396›Full record

ArticleChemistry (Weinheim an der Bergstrasse, Germany)2020

Synthesis of Oligonucleotides containing the cis-Interstrand Crosslink Produced by Mitomycins in their Reaction with DNA.

William Aguilar, Owen Zacarias, Marian Romaine, Gloria Proni, Ana G Petrovic, Rinat Abzalimov, Manuel M Paz, Elise Champeil

Open access · greenAbstract read
In one paragraph

Article in Chemistry (Weinheim an der Bergstrasse, Germany), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Synthesis of Oligonucleotides Containing Trans Mitomycin C DNA Adducts at NChemistry (Weinheim an der Bergstrasse, Germany) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

William AguilarScience Department, John Jay College of Criminal Justice, 524 West 59th street, New York, NY, 10019, USA.
Owen ZacariasScience Department, John Jay College of Criminal Justice, 524 West 59th street, New York, NY, 10019, USA.
Marian RomaineScience Department, John Jay College of Criminal Justice, 524 West 59th street, New York, NY, 10019, USA.
Gloria ProniScience Department, John Jay College of Criminal Justice, 524 West 59th street, New York, NY, 10019, USA.
Ana G PetrovicNew York Institute of Technology, 1855 Broadway, EGGC 405A, New York, NY, 10023, USA.
Rinat AbzalimovCity University of New York, Advanced Research Center, 85 St Nicholas Terrace, New York, NY, 10031, USA.
Manuel M PazDepartamento de Química Orgánica, Facultad de Química, Universidade de Santiago de Compostela, Santiago de Compostela, A Coruña, 15782, Spain.
Elise ChampeilScience Department, John Jay College of Criminal Justice, 524 West 59th street, New York, NY, 10019, USA.ORCID http://orcid.org/0000-0001-6863-899X
John Jay College of Criminal Justice · USThe Graduate Center, CUNY · USNew York Institute of Technology · USUniversidade de Santiago de Compostela · ES

Funding

Role of p21 signaling pathway in response to MC & DMC DNA Interstrand CrosslinksSC3GM105460 · NIGMS · JOHN JAY COLLEGE OF CRIMINAL JUSTICE · PI CHAMPEIL, ELISE · 2014 to 2022
$1.2M
Foundation for the National Institutes of Health 2SC3GM105460-06NIGMS NIH HHS SC3 GM105460
6 · The paper itself

Abstract

Mitomycin C (MC) an antitumor drug and decarbamoylmitomycin C (DMC), a derivative of MC lacking the carbamoyl moiety, are DNA alkylating agents which can form DNA interstrand crosslinks (ICLs) between deoxyguanosine residues located on opposing DNA strands. MC forms primarily deoxyguanosine adducts with a 1"-R stereochemistry at the guanine-mitosene bond (1"-α, trans) whereas DMC forms mainly adducts with a 1"-S stereochemistry (1"-β, cis). The crosslinking reaction is diastereospecific: trans-crosslinks are formed exclusively at CpG sequences, while cis-crosslinks are formed only at GpC sequences. Until now, oligonucleotides containing 1"-β-deoxyguanosine adducts or ICL at a specific site could not be synthesized, thus limiting the investigation of the role played by the stereochemical configuration at C1'' in the toxicity of these compounds. Here, a novel biomimetic synthesis to access these substrates is presented. Structural proof of the adducted oligonucleotides and ICL were provided by enzymatic digestion to nucleosides, high resolution mass spectral analysis, CD spectroscopy and UV melting temperature studies. Finally, a virtual model of the 25-mer 1"-β ICL synthesized was created to explore the conformational space and structural features of the crosslinked duplex.

Indexed as

DNA AdductsOligonucleotidesDNADNA DamageMitomycinsDNADNA AdductsMitomycinsOligonucleotidesbiomimetic synthesisconformational studiesinterstrand crosslinkmitomycinsite-specific alkylation

Identifiers

PMID32574396
PMCPMC7681910
OpenAlexW3036551478

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.