Evidence map›Paper›PMID 32573973›Full record

ArticleMolecular genetics & genomic medicine2020

Disrupted minor intron splicing is prevalent in Mendelian disorders.

Anouk M Olthof, Jeffrey S Rasmussen, Philippe M Campeau, Rahul N Kanadia

Open access · goldAbstract read
In one paragraph

Article in Molecular genetics & genomic medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 15 citations in OpenAlex.

  1. RNU4ATAC-opathy: Clinical, molecular, and transcriptomic insights from a large cohort.Genetics in medicine : official journal of the American College of Medical Genetics · 2026
    Article
  2. Article
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  4. Deficiency of the minor spliceosome component U4atac snRNA secondarily results in ciliary defects in human and zebrafish.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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  6. Review
  7. Article
  8. iScience · 2022
    Article
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  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Anouk M OlthofDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, CT, USA.
Jeffrey S RasmussenDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, CT, USA.
Philippe M CampeauDepartment of Pediatrics, University of Montreal, Montreal, QC, Canada.ORCID 0000-0001-9713-7107
Rahul N KanadiaDepartment of Physiology and Neurobiology, University of Connecticut, Storrs, CT, USA.ORCID 0000-0001-7197-912X
University of Connecticut · USUniversité de Montréal · CA

Funding

Understanding the role of minor intron splicing in cortical developmentR01NS102538 · NINDS · UNIVERSITY OF CONNECTICUT STORRS · PI KANADIA, RAHUL N · 2018 to 2022
$1.8M
Understanding the role of minor spliceosome in the pathogenesis of amyotrophic lateral sclerosisR21NS101616 · NINDS · UNIVERSITY OF CONNECTICUT STORRS · PI KANADIA, RAHUL N · 2017 to 2018
$424k
NINDS NIH HHS R01 NS102538NINDS NIH HHS R21 NS101616
6 · The paper itself

Abstract

backgroundSplicing is crucial for proper gene expression, and is predominately executed by the major spliceosome. Conversely, 722 introns in 699 human minor intron-containing genes (MIGs) are spliced by the minor spliceosome. Splicing of these minor introns is disrupted in diseases caused by pathogenic variants in the minor spliceosome, ultimately leading to the aberrant expression of a subset of these MIGs. However, the effect of variants in minor introns and MIGs on diseases remains unexplored.

methodsVariants in MIGs and associated clinical manifestations were identified using ClinVar. The HPO database was then used to curate the related symptoms and affected organ systems.

resultsWe found pathogenic variants in 211 MIGs, which commonly resulted in intellectual disability, seizures and microcephaly. This revealed a subset of MIGs whose aberrant splicing may contribute to the pathogenesis of minor spliceosome-related diseases. Moreover, we identified 51 pathogenic variants in minor intron splice sites that reduce the splice site strength and can induce alternative splicing.

conclusionThese findings highlight that disrupted minor intron splicing has a broader impact on human diseases than previously appreciated. The hope is that this knowledge will aid in the development of therapeutic strategies that incorporate the minor intron splicing pathway.

Indexed as

Gene FrequencyIntronsRNA Splice SitesAlternative SplicingGenetic Diseases, InbornHumansRNA Splice Sitesdiseaseminor spliceosomenervous systemsplice sitevariant

Identifiers

PMID32573973
PMCPMC7507305
OpenAlexW3037027340

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.