Evidence map›Paper›PMID 32572534›Full record

ArticleMicrobial ecology2020

Microbial Community Structure Along a Horizontal Oxygen Gradient in a Costa Rican Volcanic Influenced Acid Rock Drainage System.

Alejandro Arce-Rodríguez, Fernando Puente-Sánchez, Roberto Avendaño, Eduardo Libby, Raúl Mora-Amador, Keilor Rojas-Jimenez, María Martínez, Dietmar H Pieper, Max Chavarría

Open access · greenAbstract read
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In one paragraph

Article in Microbial ecology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Alejandro Arce-RodríguezMicrobial Interactions and Processes Research Group, Helmholtz Centre for Infection Research, 38124, Braunschweig, Germany.
Fernando Puente-SánchezSystems Biology Program, Centro Nacional de Biotecnología (CNB-CSIC), C/Darwin 3, 28049, Madrid, Spain.
Roberto AvendañoCentro Nacional de Innovaciones Biotecnológicas (CENIBiot), CeNAT-CONARE, San José, 1174-1200, Costa Rica.
Eduardo LibbyEscuela de Química, Universidad de Costa Rica, San José, 11501-2060, Costa Rica.
Raúl Mora-AmadorEscuela Centroamericana de Geología, Universidad de Costa Rica, San José, 11501-2060, Costa Rica.
Keilor Rojas-JimenezEscuela de Biología, Universidad de Costa Rica, San José, 11501-2060, Costa Rica.
María MartínezObservatorio Vulcanológico y Sismológico de Costa Rica, Universidad Nacional (OVSICORI-UNA), Heredia, 2386-3000, Costa Rica.
Dietmar H PieperMicrobial Interactions and Processes Research Group, Helmholtz Centre for Infection Research, 38124, Braunschweig, Germany.
Max ChavarríaCentro Nacional de Innovaciones Biotecnológicas (CENIBiot), CeNAT-CONARE, San José, 1174-1200, Costa Rica. max.chavarria@ucr.ac.cr.ORCID https://orcid.org/0000-0001-5901-3576
Universidad de Costa Rica · CRHelmholtz Centre for Infection Research · DECentro Nacional de Biotecnología · ESDistance State University · CRUniversidad Nacional · CR

Funding

ERC grant IPBSL ERC250350-IPBSLSpanish Economy and Competitiveness Ministry (MINECO) CTM2016-80095-C2-1-RThe Costa Rican Ministry of Science, Technology and Telecommunication (MICITT) and Federal Ministry of Education and Research (BMBF) No FI-255B-17Vicerrectoría de Investigación, Universidad de Costa Rica VI 809-B6-524
6 · The paper itself

Abstract

We describe the geochemistry and microbial diversity of a pristine environment that resembles an acid rock drainage (ARD) but it is actually the result of hydrothermal and volcanic influences. We designate this environment, and other comparable sites, as volcanic influenced acid rock drainage (VARD) systems. The metal content and sulfuric acid in this ecosystem stem from the volcanic milieu and not from the product of pyrite oxidation. Based on the analysis of 16S rRNA gene amplicons, we report the microbial community structure in the pristine San Cayetano Costa Rican VARD environment (pH = 2.94-3.06, sulfate ~ 0.87-1.19 g L

Indexed as

ArchaeaBacteriaCosta RicaHydrogen-Ion ConcentrationMicrobiotaOxygenRiversRNA, ArchaealRNA, BacterialRNA, Ribosomal, 16SVolcanic EruptionsOxygenRNA, ArchaealRNA, BacterialRNA, Ribosomal, 16SAcid rock drainageCosta RicaMicrobial communitiesOxygen gradientSan Cayetano

Identifiers

PMID32572534
OpenAlexW3036913119

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.