Evidence map›Paper›PMID 32571939›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

A combined activation mechanism for the glucagon receptor.

Giulio Mattedi, Silvia Acosta-Gutiérrez, Timothy Clark, Francesco Luigi Gervasio

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

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  11. Entropy drives the ligand recognition in G-protein-coupled receptor subtypes.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  13. OneOPES, a Combined Enhanced Sampling Method to Rule Them All.Journal of chemical theory and computation · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Giulio MattediDepartment of Chemistry, University College London, London WC1E 6BT, United Kingdom.ORCID 0000-0002-7290-694X
Silvia Acosta-GutiérrezDepartment of Chemistry, University College London, London WC1E 6BT, United Kingdom.ORCID 0000-0002-0122-9769
Timothy ClarkComputer-Chemistry Center, Department of Chemistry and Pharmacy, Friedrich-Alexander-University Erlangen-Nürnberg, Erlangen 91052, Germany.
Francesco Luigi GervasioDepartment of Chemistry, University College London, London WC1E 6BT, United Kingdom; francesco.gervasio@unige.ch.ORCID 0000-0003-4831-5039

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We report on a combined activation mechanism for a class B G-protein-coupled receptor (GPCR), the glucagon receptor. By computing the conformational free-energy landscape associated with the activation of the receptor-agonist complex and comparing it with that obtained with the ternary complex (receptor-agonist-G protein) we show that the agonist stabilizes the receptor in a preactivated complex, which is then fully activated upon binding of the G protein. The proposed mechanism contrasts with the generally assumed GPCR activation mechanism, which proceeds through an opening of the intracellular region allosterically elicited by the binding of the agonist. The mechanism found here is consistent with electron cryo-microscopy structural data and might be general for class B GPCRs. It also helps us to understand the mode of action of the numerous allosteric antagonists of this important drug target.

Indexed as

Protein DomainsAllosteric RegulationCell MembraneCrystallography, X-RayDrug DesignGlucagonGTP-Binding ProteinsMolecular Dynamics SimulationReceptors, GlucagonStructure-Activity RelationshipGlucagonGTP-Binding ProteinsReceptors, Glucagonactivationenhanced samplingglucagon receptorGPCR

Identifiers

PMID32571939
PMCPMC7355025

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.