Evidence map›Paper›PMID 32571913›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Bacterial metabolism rescues the inhibition of intestinal drug absorption by food and drug additives.

Ling Zou, Peter Spanogiannopoulos, Lindsey M Pieper, Huan-Chieh Chien, Wenlong Cai, Natalia Khuri, Joshua Pottel, Bianca Vora, Zhanglin Ni, Eleftheria Tsakalozou and 4 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Ultra-processed foods and food additives in gut health and disease.Nature reviews. Gastroenterology & hepatology · 2024
    Review
  12. Article
  13. Integrating the gut microbiome and pharmacology.Science translational medicine · 2024
    Review
  14. Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Ling ZouDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA 94158.ORCID 0000-0002-0128-7950
Peter SpanogiannopoulosDepartment of Microbiology and Immunology, G.W. Hooper Research Foundation, University of California, San Francisco, CA 94143.ORCID 0000-0003-0826-7730
Lindsey M PieperDepartment of Microbiology and Immunology, G.W. Hooper Research Foundation, University of California, San Francisco, CA 94143.
Huan-Chieh ChienDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA 94158.
Wenlong CaiDepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94720.
Natalia KhuriDepartment of Bioengineering, Stanford University, Stanford, CA 94305.ORCID 0000-0001-9031-8124
Joshua PottelDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94158.ORCID 0000-0002-4455-4713
Bianca VoraDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA 94158.
Zhanglin NiDivision of Quantitative Methods and Modeling, Office of Research and Standards, Office of Generic Drugs, Center for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, MD 20993.
Eleftheria TsakalozouDivision of Quantitative Methods and Modeling, Office of Research and Standards, Office of Generic Drugs, Center for Drug Evaluation and Research, US Food and Drug Administration, Silver Spring, MD 20993.
Wenjun ZhangDepartment of Chemical and Biomolecular Engineering, University of California, Berkeley, CA 94720.ORCID 0000-0001-9348-972X
Brian K ShoichetDepartment of Pharmaceutical Chemistry, University of California, San Francisco, CA 94158.
Kathleen M GiacominiDepartment of Bioengineering and Therapeutic Sciences, University of California, San Francisco, CA 94158; kathy.giacomini@ucsf.edu peter.turnbaugh@ucsf.edu.ORCID 0000-0001-8041-5430
Peter J TurnbaughDepartment of Microbiology and Immunology, G.W. Hooper Research Foundation, University of California, San Francisco, CA 94143; kathy.giacomini@ucsf.edu peter.turnbaugh@ucsf.edu.ORCID 0000-0002-0888-2875
University of California, San Francisco · USUnited States Food and Drug Administration · USChan Zuckerberg Initiative (United States) · USStanford University · USUniversity of California, Berkeley · US

Funding

UCSF-Stanford Center of Excellence in Regulatory Science and InnovationU01FD005978 · FDA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ALTMAN, RUSS BIAGIO, GIACOMINI, KATHLEEN M · 2016 to 2025
$34.5M
Predicting and preventing drug metabolism by the human gut microbiomeR01HL122593 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Peter James Turnbaugh · 2016 to 2026
$5.7M
UCSF-Stanford Center of Excellence in Regulatory Science and InnovationU01FD004979 · FDA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ALTMAN, RUSS BIAGIO, GIACOMINI, KATHLEEN M · 2014 to 2016
$5.4M
(PQ10) Harnessing the human gut microbiome to predict chemotherapy outcomesR21CA227232 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI ATREYA, CHLOE E., TURNBAUGH, PETER JAMES · 2018 to 2019
$378k
CIHRFDA HHS U01 FD004979FDA HHS U01 FD005978NCI NIH HHS R21 CA227232NHLBI NIH HHS R01 HL122593
6 · The paper itself

Abstract

Food and drug products contain diverse and abundant small-molecule additives (excipients) with unclear impacts on human physiology, drug safety, and response. Here, we evaluate their potential impact on intestinal drug absorption. By screening 136 unique compounds for inhibition of the key intestinal transporter OATP2B1 we identified and validated 24 potent OATP2B1 inhibitors, characterized by higher molecular weight and hydrophobicity compared to poor or noninhibitors. OATP2B1 inhibitors were also enriched for dyes, including 8 azo (R-N=N-R') dyes. Pharmacokinetic studies in mice confirmed that FD&C Red No. 40, a common azo dye excipient and a potent inhibitor of OATP2B1, decreased the plasma level of the OATP2B1 substrate fexofenadine, suggesting that FD&C Red No. 40 has the potential to block drug absorption through OATP2B1 inhibition in vivo. However, the gut microbiomes of multiple unrelated healthy individuals as well as diverse human gut bacterial isolates were capable of inactivating the identified azo dye excipients, producing metabolites that no longer inhibit OATP2B1 transport. These results support a beneficial role for the microbiome in limiting the unintended effects of food and drug additives in the intestine and provide a framework for the data-driven selection of excipients. Furthermore, the ubiquity and genetic diversity of gut bacterial azoreductases coupled to experiments in conventionally raised and gnotobiotic mice suggest that variations in gut microbial community structure may be less important to consider relative to the high concentrations of azo dyes in food products, which have the potential to saturate gut bacterial enzymatic activity.

Indexed as

FoodAnimalsAnti-Allergic AgentsATP-Binding Cassette Sub-Family B Member 4ATP Binding Cassette Transporter, Subfamily BAzo CompoundsBacteriaExcipientsFemaleFood AdditivesGastrointestinal MicrobiomeHistamine H1 Antagonists, Non-SedatingHumansIntestinal AbsorptionMaleMiceAnti-Allergic AgentsATP-Binding Cassette Sub-Family B Member 4ATP Binding Cassette Transporter, Subfamily BAzo CompoundsExcipientsfexofenadineFood AdditivesHistamine H1 Antagonists, Non-Sedatingmultidrug resistance protein 3Organic Anion TransportersSLCO2B1 protein, humanSlco2b1 protein, mouseTerfenadineazoreductasesdrug absorptionexcipientsfood additiveshuman gut microbiome

Identifiers

PMID32571913
PMCPMC7355017
OpenAlexW3035779321

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.